Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyE set domains8054981 3000070 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyE set domains8054981 3000070 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyE set domains8054981 3000070 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AFlavi_glycop_Ce6zquA3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Flavi_glycop_CECOD (1.6)
AFlavi_glycoprote6zquA1 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Flavi_glycoprotECOD (1.6)
Aflavi_E_steme6zquA2 A: alpha arraysX: Transmembrane domain of envelope protein E (From Topology)H: Transmembrane domain of envelope protein E (From Topology)T: Transmembrane domain of envelope protein EF: flavi_E_stemECOD (1.6)
CFlavi_glycop_Ce6zquC2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Flavi_glycop_CECOD (1.6)
CFlavi_glycoprote6zquC1 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Flavi_glycoprotECOD (1.6)
Cflavi_E_steme6zquC3 A: alpha arraysX: Transmembrane domain of envelope protein E (From Topology)H: Transmembrane domain of envelope protein E (From Topology)T: Transmembrane domain of envelope protein EF: flavi_E_stemECOD (1.6)
EFlavi_glycop_Ce6zquE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Flavi_glycop_CECOD (1.6)
EFlavi_glycoprote6zquE3 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Flavi_glycoprotECOD (1.6)
Eflavi_E_steme6zquE2 A: alpha arraysX: Transmembrane domain of envelope protein E (From Topology)H: Transmembrane domain of envelope protein E (From Topology)T: Transmembrane domain of envelope protein EF: flavi_E_stemECOD (1.6)
BFlavi_Me6zquB1 A: extended segmentsX: Small envelope protein M (From Topology)H: Small envelope protein M (From Topology)T: Small envelope protein MF: Flavi_MECOD (1.6)
DFlavi_Me6zquD1 A: extended segmentsX: Small envelope protein M (From Topology)H: Small envelope protein M (From Topology)T: Small envelope protein MF: Flavi_MECOD (1.6)
FFlavi_Me6zquF1 A: extended segmentsX: Small envelope protein M (From Topology)H: Small envelope protein M (From Topology)T: Small envelope protein MF: Flavi_MECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E
PF00869Flavivirus glycoprotein, central and dimerisation domains (Flavi_glycoprot)Flavivirus glycoprotein, central and dimerisation domains- Domain
A, C, E
PF21659Flavivirus envelope glycoprotein E, stem/anchor domain (Flavi_E_stem)Flavivirus envelope glycoprotein E, stem/anchor domainThis entry represents the stem/anchor domain found at the C-terminal of envelope glycoprotein E from Flavivirus. This domain comprises a stem region followed by two transmembrane anchor domains [1-5].Domain
A, C, E
PF02832Flavivirus glycoprotein, immunoglobulin-like domain (Flavi_glycop_C)Flavivirus glycoprotein, immunoglobulin-like domain- Domain
B, D, F
PF01004Flavivirus envelope glycoprotein M (Flavi_M)Flavivirus envelope glycoprotein M- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E
Genome polyprotein
B, D, F
Genome polyprotein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C, E
IPR000208RNA-directed RNA polymerase, fingers/palm subdomains, flavivirusDomain
A, C, E
IPR014756Immunoglobulin E-setHomologous Superfamily
A, C, E
IPR001122Capsid protein C, flavivirusDomain
A, C, E
IPR027287Glycoprotein E, immunoglobulin-like domain, flavivirusDomain
A, C, E
IPR014412Genome polyprotein, FlavivirusFamily
A, C, E
IPR036253Flavivirus glycoprotein, central and dimerisation domain superfamilyHomologous Superfamily
A, C, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, C, E
IPR026490mRNA cap 0/1 methyltransferaseDomain
A, C, E
IPR009003Peptidase S1, PA clanHomologous Superfamily
A, C, E
IPR001650Helicase, C-terminal domain-likeDomain
A, C, E
IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
A, C, E
IPR013755Flaviviral glycoprotein E, central domain, subdomain 1Homologous Superfamily
A, C, E
IPR000752Flavivirus non-structural protein NS2ADomain
A, C, E
IPR047530RNA-dependent RNA polymerase, flavivirusDomain
A, C, E
IPR049486Flavivridae NS3 helicase, C-terminal helical domainDomain
A, C, E
IPR046811RNA-directed RNA polymerase, thumb subdomain, flavivirusDomain
A, C, E
IPR038055Flaviviral glycoprotein E, dimerisation domainHomologous Superfamily
A, C, E
IPR002877Ribosomal RNA methyltransferase, FtsJ domainDomain
A, C, E
IPR038302Envelope glycoprotein M superfamily, flavivirusHomologous Superfamily
A, C, E
IPR000069Envelope glycoprotein M, flavivirusDomain
A, C, E
IPR011492Non-structural protein NS3-like, DEAD box helicase, flavivirusDomain
A, C, E
IPR038345Flavivirus envelope glycoprotein E, Stem/Anchor domain superfamilyHomologous Superfamily
A, C, E
IPR038688Flavivirus polyprotein propeptide superfamilyHomologous Superfamily
A, C, E
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
A, C, E
IPR026470Flavivirus envelope glycoprotein E, Stem/Anchor domainDomain
A, C, E
IPR011998Envelope glycoprotein E, central and dimerisation domain, flavivirusDomain
A, C, E
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
A, C, E
IPR037172Flavivirus capsid protein C superfamilyHomologous Superfamily
A, C, E
IPR000404Flavivirus non-structural protein NS4ADomain
A, C, E
IPR000487Non-structural protein NS2B, flavivirusDomain
A, C, E
IPR001528Flavivirus non-structural protein NS4BDomain
A, C, E
IPR001157Non-structural protein NS1, flavivirusDomain
A, C, E
IPR013756Flaviviral glycoprotein E, central domain, subdomain 2Homologous Superfamily
A, C, E
IPR001850Non-structural protein NS3, peptidase S7, flavivirusDomain
A, C, E
IPR000336Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamilyHomologous Superfamily
A, C, E
IPR002535Flavivirus polyprotein propeptideDomain
A, C, E
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
A, C, E
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
B, D, F
IPR000208RNA-directed RNA polymerase, fingers/palm subdomains, flavivirusDomain
B, D, F
IPR014756Immunoglobulin E-setHomologous Superfamily
B, D, F
IPR001122Capsid protein C, flavivirusDomain
B, D, F
IPR027287Glycoprotein E, immunoglobulin-like domain, flavivirusDomain
B, D, F
IPR014412Genome polyprotein, FlavivirusFamily
B, D, F
IPR036253Flavivirus glycoprotein, central and dimerisation domain superfamilyHomologous Superfamily
B, D, F
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B, D, F
IPR026490mRNA cap 0/1 methyltransferaseDomain
B, D, F
IPR009003Peptidase S1, PA clanHomologous Superfamily
B, D, F
IPR001650Helicase, C-terminal domain-likeDomain
B, D, F
IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
B, D, F
IPR013755Flaviviral glycoprotein E, central domain, subdomain 1Homologous Superfamily
B, D, F
IPR000752Flavivirus non-structural protein NS2ADomain
B, D, F
IPR047530RNA-dependent RNA polymerase, flavivirusDomain
B, D, F
IPR049486Flavivridae NS3 helicase, C-terminal helical domainDomain
B, D, F
IPR046811RNA-directed RNA polymerase, thumb subdomain, flavivirusDomain
B, D, F
IPR038055Flaviviral glycoprotein E, dimerisation domainHomologous Superfamily
B, D, F
IPR002877Ribosomal RNA methyltransferase, FtsJ domainDomain
B, D, F
IPR038302Envelope glycoprotein M superfamily, flavivirusHomologous Superfamily
B, D, F
IPR000069Envelope glycoprotein M, flavivirusDomain
B, D, F
IPR011492Non-structural protein NS3-like, DEAD box helicase, flavivirusDomain
B, D, F
IPR038345Flavivirus envelope glycoprotein E, Stem/Anchor domain superfamilyHomologous Superfamily
B, D, F
IPR038688Flavivirus polyprotein propeptide superfamilyHomologous Superfamily
B, D, F
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
B, D, F
IPR026470Flavivirus envelope glycoprotein E, Stem/Anchor domainDomain
B, D, F
IPR011998Envelope glycoprotein E, central and dimerisation domain, flavivirusDomain
B, D, F
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
B, D, F
IPR037172Flavivirus capsid protein C superfamilyHomologous Superfamily
B, D, F
IPR000404Flavivirus non-structural protein NS4ADomain
B, D, F
IPR000487Non-structural protein NS2B, flavivirusDomain
B, D, F
IPR001528Flavivirus non-structural protein NS4BDomain
B, D, F
IPR001157Non-structural protein NS1, flavivirusDomain
B, D, F
IPR013756Flaviviral glycoprotein E, central domain, subdomain 2Homologous Superfamily
B, D, F
IPR001850Non-structural protein NS3, peptidase S7, flavivirusDomain
B, D, F
IPR000336Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamilyHomologous Superfamily
B, D, F
IPR002535Flavivirus polyprotein propeptideDomain
B, D, F
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
B, D, F
IPR007094RNA-directed RNA polymerase, catalytic domainDomain