7KIY

Plasmodium falciparum RhopH complex in soluble form


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.92 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Malaria parasites use a soluble RhopH complex for erythrocyte invasion and an integral form for nutrient uptake.

Schureck, M.A.Darling, J.E.Merk, A.Shao, J.Daggupati, G.Srinivasan, P.Olinares, P.D.B.Rout, M.P.Chait, B.T.Wollenberg, K.Subramaniam, S.Desai, S.A.

(2021) Elife 10

  • DOI: https://doi.org/10.7554/eLife.65282
  • Primary Citation of Related Structures:  
    7KIY

  • PubMed Abstract: 

    Malaria parasites use the RhopH complex for erythrocyte invasion and channel-mediated nutrient uptake. As the member proteins are unique to Plasmodium spp., how they interact and traffic through subcellular sites to serve these essential functions is unknown. We show that RhopH is synthesized as a soluble complex of CLAG3, RhopH2, and RhopH3 with 1:1:1 stoichiometry. After transfer to a new host cell, the complex crosses a vacuolar membrane surrounding the intracellular parasite and becomes integral to the erythrocyte membrane through a PTEX translocon-dependent process. We present a 2.9 Å single-particle cryo-electron microscopy structure of the trafficking complex, revealing that CLAG3 interacts with the other subunits over large surface areas. This soluble complex is tightly assembled with extensive disulfide bonding and predicted transmembrane helices shielded. We propose a large protein complex stabilized for trafficking but poised for host membrane insertion through large-scale rearrangements, paralleling smaller two-state pore-forming proteins in other organisms.


  • Organizational Affiliation

    Laboratory of Malaria and Vector Research, NIAID, National Institutes of Health, Rockville, United States.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Cytoadherence linked asexual protein 31,505Plasmodium falciparumMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A1W6IZK1 (Plasmodium falciparum)
Explore A0A1W6IZK1 
Go to UniProtKB:  A0A1W6IZK1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A1W6IZK1
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
High molecular weight rhoptry protein-21,378Plasmodium falciparumMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for B0M158 (Plasmodium falciparum)
Explore B0M158 
Go to UniProtKB:  B0M158
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupB0M158
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
High molecular weight rhoptry protein 3897Plasmodium falciparumMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for B0M0W2 (Plasmodium falciparum)
Explore B0M0W2 
Go to UniProtKB:  B0M0W2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupB0M0W2
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.92 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.16-3549

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United States--

Revision History  (Full details and data files)

  • Version 1.0: 2021-01-13
    Type: Initial release