1EDY

CRYSTAL STRUCTURE OF RAT ALPHA 1-MACROGLOBULIN RECEPTOR BINDING DOMAIN

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1edya_	All beta proteins	Immunoglobulin-like beta-sandwich	Macroglobulin	Alpha-macroglobulin receptor domain	alpha-1-macroglobulin	Norway rat (Rattus norvegicus ) [TaxId: 10116 ],	SCOPe (2.08)
B	d1edyb_	All beta proteins	Immunoglobulin-like beta-sandwich	Macroglobulin	Alpha-macroglobulin receptor domain	alpha-1-macroglobulin	Norway rat (Rattus norvegicus ) [TaxId: 10116 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	alpha-macroglobulin receptor domain	8027832	4002046	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	alpha-macroglobulin receptor domain	8040211	3000742	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	alpha-macroglobulin receptor domain	8040211	3000742	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	A2M_recep	e1edyA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: A2M_recep	ECOD (1.6)
B	A2M_recep	e1edyB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: A2M_recep	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.690	Mainly Beta	Sandwich	Immunoglobulin-like	Alpha-macroglobulin, receptor-binding domain	CATH (4.3.0)
B	2.60.40.690	Mainly Beta	Sandwich	Immunoglobulin-like	Alpha-macroglobulin, receptor-binding domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF07677	A-macroglobulin receptor binding domain (A2M_recep)	A-macroglobulin receptor binding domain	This family includes the receptor binding domain region of the alpha-2-macroglobulin family.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	ALPHA 1-MACROGLOBULIN	enzyme regulator activity molecular function inhibitor activity peptidase regulator activity serine-type endopeptidase inhibitor activity molecular function regulator activity enzyme inhibitor activity peptidase inhibitor activity endopeptidase regulator activity endopeptidase inhibitor activity protein-containing complex binding binding neurotrophin binding brain-derived neurotrophic factor binding protein binding enzyme regulator activity molecular function inhibitor activity peptidase regulator activity serine-type endopeptidase inhibitor activity molecular function regulator activity enzyme inhibitor activity peptidase inhibitor activity endopeptidase regulator activity endopeptidase inhibitor activity protein-containing complex binding binding neurotrophin binding brain-derived neurotrophic factor binding protein binding growth factor binding enzyme binding protease binding nerve growth factor binding	-	cellular anatomical structure extracellular region extracellular space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR041813	Alpha-2-macroglobulin, TED domain	Domain
A, B	IPR019742	Alpha-2-macroglobulin, conserved site	Conserved Site
A, B	IPR009048	Alpha-macroglobulin, receptor-binding	Domain
A, B	IPR011625	Alpha-2-macroglobulin, bait region domain	Domain
A, B	IPR041555	Macroglobulin domain MG3	Domain
A, B	IPR011626	Alpha-macroglobulin-like, TED domain	Domain
A, B	IPR001599	Alpha-2-macroglobulin	Domain
A, B	IPR047565	Alpha-macroglobulin-like, thiol-ester bond-forming region	Conserved Site
A, B	IPR036595	Alpha-macroglobulin, receptor-binding domain superfamily	Homologous Superfamily
A, B	IPR002890	Macroglobulin domain	Domain
A, B	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A, B	IPR050473	Alpha-2-macroglobulin/Complement system	Family
A, B	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A, B	IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	Homologous Superfamily
A, B	IPR040839	Macroglobulin domain MG4	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.