1RCS
NMR STUDY OF TRP REPRESSOR-OPERATOR DNA COMPLEX
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth B] | d1rcsb_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | TrpR-like | Trp repressor, TrpR | Trp repressor, TrpR | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
C [auth A] | d1rcsa_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | TrpR-like | Trp repressor, TrpR | Trp repressor, TrpR | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth B] | SCOP2B Superfamily | TrpR-like | 8038304 | 3001097 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | TrpR-like | 8038304 | 3001097 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth B] | Trp_repressor | e1rcsB1 | A: alpha arrays | X: HTH | H: HTH | T: TrpR | F: Trp_repressor | ECOD (1.6) |
C [auth A] | Trp_repressor | e1rcsA1 | A: alpha arrays | X: HTH | H: HTH | T: TrpR | F: Trp_repressor | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D [auth B] | 1.10.1270.10 | Mainly Alpha | Orthogonal Bundle | Trp Operon Repressor | Chain A | CATH (4.3.0) |
C [auth A] | 1.10.1270.10 | Mainly Alpha | Orthogonal Bundle | Trp Operon Repressor | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], D [auth B] | PF01371 | Trp repressor protein (Trp_repressor) | Trp repressor protein | This protein binds to tryptophan and represses transcription of the Trp operon. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth E], B [auth F] | DNA (5'-D(*CP*GP*TP*AP*CP*TP*AP*GP*TP*TP*AP*AP*CP*TP*AP*GP*TP*AP*CP*G)-3') | - | - | - |
C [auth A], D [auth B] | TRP REPRESSOR |
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InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR038116 | TrpR-like superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR000831 | Trp repressor | Family |
C [auth A], D [auth B] | IPR013335 | Trp repressor, bacterial | Family |
C [auth A], D [auth B] | IPR010921 | Trp repressor/replication initiator | Homologous Superfamily |