2OFY
Crystal structure of putative XRE-family transcriptional regulator from Rhodococcus sp.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2ofya1 | All alpha proteins | lambda repressor-like DNA-binding domains | lambda repressor-like DNA-binding domains | SinR domain-like | Putative transcriptional regulator RHA1_ro04071 | (Rhodococcus jostii RHA1 ) [TaxId: 101510 ], | SCOPe (2.08) |
| B | d2ofyb_ | All alpha proteins | lambda repressor-like DNA-binding domains | lambda repressor-like DNA-binding domains | SinR domain-like | Putative transcriptional regulator RHA1_ro04071 | (Rhodococcus jostii RHA1 ) [TaxId: 101510 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | SinR domain-like | 8022696 | 4000896 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | lambda C1 repressor DNA-binding domain-like | 8035076 | 3000119 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8035076 | 3000119 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | HTH_3_4 | e2ofyA1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_4 | ECOD (1.6) |
| B | HTH_3_4 | e2ofyB1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_4 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.10.260.40 | Mainly Alpha | Orthogonal Bundle | 434 Repressor (Amino-terminal Domain) | lambda repressor-like DNA-binding domains | CATH (4.3.0) |
| B | 1.10.260.40 | Mainly Alpha | Orthogonal Bundle | 434 Repressor (Amino-terminal Domain) | lambda repressor-like DNA-binding domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF13560 | Helix-turn-helix domain (HTH_31) | Helix-turn-helix domain | This domain is a helix-turn-helix domain that probably binds to DNA. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative XRE-family transcriptional regulator | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR001387 | Cro/C1-type helix-turn-helix domain | Domain | |
| IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | Homologous Superfamily |
