2WQP
Crystal structure of sialic acid synthase NeuB-inhibitor complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2wqpa2 | All beta proteins | beta-clip | AFP III-like domain | automated matches | automated matches | (Neisseria meningitidis serogroup B ) [TaxId: 491 ], | SCOPe (2.08) |
A | d2wqpa1 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | NeuB-like | automated matches | (Neisseria meningitidis serogroup B ) [TaxId: 491 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SAF | e2wqpA1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: SAF | ECOD (1.6) |
A | NeuB | e2wqpA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: NeuB | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
A | 3.90.1210.10 | Alpha Beta | Alpha-Beta Complex | Type Iii Antifreeze Protein Isoform Hplc 12 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03102 | NeuB family (NeuB) | NeuB family | NeuB is the prokaryotic N-acetylneuraminic acid (Neu5Ac) synthase. It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been ob ... | Domain | |
PF08666 | SAF domain (SAF) | SAF domain | This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
POLYSIALIC ACID CAPSULE BIOSYNTHESIS PROTEIN SIAC | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006190 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal | Domain | |
IPR036732 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily | Homologous Superfamily | |
IPR051690 | Nonulosonic Acid Synthase | Family | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR013974 | SAF domain | Domain | |
IPR013132 | N-acetylneuraminic acid synthase, N-terminal | Domain |