3KTT
Atomic model of bovine TRiC CCT2(beta) subunit derived from a 4.0 Angstrom cryo-EM map
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | Cpn60_TCP1_1st | e3kttB5 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
A [auth B] | Cpn60_TCP1_2nd | e3kttB3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
A [auth B] | Cpn60_TCP1_2nd_1 | e3kttB4 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 1.10.560.10 | Mainly Alpha | Orthogonal Bundle | GROEL | domain 1 | CATH (4.3.0) |
A [auth B] | 3.30.260.10 | Alpha Beta | 2-Layer Sandwich | GROEL | domain 2 | CATH (4.3.0) |
A [auth B] | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B] | PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B] | IPR027413 | GroEL-like equatorial domain superfamily | Homologous Superfamily |
A [auth B] | IPR027410 | TCP-1-like chaperonin intermediate domain superfamily | Homologous Superfamily |
A [auth B] | IPR002194 | Chaperonin TCP-1, conserved site | Conserved Site |
A [auth B] | IPR017998 | Chaperone tailless complex polypeptide 1 (TCP-1) | Family |
A [auth B] | IPR012716 | T-complex protein 1, beta subunit | Family |
A [auth B] | IPR053374 | TCP-1 chaperonin-containing T-complex | Family |
A [auth B] | IPR027409 | GroEL-like apical domain superfamily | Homologous Superfamily |
A [auth B] | IPR002423 | Chaperonin Cpn60/GroEL/TCP-1 family | Family |