3PZD
Structure of the myosin X MyTH4-FERM/DCC complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FERM_C1_MyoVII | e3pzdA5 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: FERM_C1_MyoVII | ECOD (1.6) |
A | FERM_M | e3pzdA3 | A: alpha bundles | X: Acyl-CoA binding protein-like (From Topology) | H: Acyl-CoA binding protein-like (From Topology) | T: Acyl-CoA binding protein-like | F: FERM_M | ECOD (1.6) |
A | MyTH4 | e3pzdA4 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: MyTH4 | ECOD (1.6) |
A | RA_2 | e3pzdA6 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RA_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.40.530 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | MyTH4 domain | CATH (4.3.0) |
A | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
A | 1.20.80.10 | Mainly Alpha | Up-down Bundle | Acyl-CoA Binding Protein | CATH (4.3.0) | |
A | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00788 | Ras association (RalGDS/AF-6) domain (RA) | Ras association (RalGDS/AF-6) domain | RasGTP effectors (in cases of AF6, canoe and RalGDS); putative RasGTP effectors in other cases. Recent evidence (not yet in MEDLINE) shows that some RA domains do NOT bind RasGTP. Predicted structure [3] similar to that determined [1], and that of th ... | Domain | |
PF21989 | RA like domain (RA_2) | RA like domain | Domain | ||
PF00373 | FERM central domain (FERM_M) | FERM central domain | This domain is the central structural domain of the FERM domain. | Domain | |
PF00784 | MyTH4 domain (MyTH4) | MyTH4 domain | - | Family | |