5YJC
Structural insights into the CRISPR-Cas-associated ribonuclease activity of Staphylococcus epidermidis Csm6
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UNK_F_TYPE | e5yjcA1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: UNK_F_TYPE | ECOD (1.6) |
A | UNK_F_TYPE | e5yjcA2 | A: alpha bundles | X: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology) | H: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology) | T: CRISPR/Cas system-associated protein Csm6 6H domain | F: UNK_F_TYPE | ECOD (1.6) |
B | UNK_F_TYPE | e5yjcB1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: UNK_F_TYPE | ECOD (1.6) |
B | UNK_F_TYPE | e5yjcB2 | A: alpha bundles | X: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology) | H: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology) | T: CRISPR/Cas system-associated protein Csm6 6H domain | F: UNK_F_TYPE | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09659 | Cas_Csm6 HEPN domain (Cas_Csm6_HEPN) | Cas_Csm6 HEPN domain | This entry represents the HEPN domain of Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix domain and a C-terminal HEPN dom ... | Domain | |
PF22206 | CRISPR-associated protein Csm6 6H domain (Cas_Csm6_6H) | CRISPR-associated protein Csm6 6H domain | This entry includes Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix (6H) domain and a C-terminal HEPN domain at the C-ter ... | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR053941 | Csm6, HEPN domain | Domain | |
IPR053955 | Csm6, CARF domain | Domain | |
IPR013489 | CRISPR-associated protein Csm6 | Family |