5YJC

Structural insights into the CRISPR-Cas-associated ribonuclease activity of Staphylococcus epidermidis Csm6


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AUNK_F_TYPEe5yjcA1 A: alpha bundlesX: Four-helical up-and-down bundleH: HEPNT: Nucleotidyltransferase substrate binding subunit/domainF: UNK_F_TYPEECOD (1.6)
AUNK_F_TYPEe5yjcA2 A: alpha bundlesX: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)H: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)T: CRISPR/Cas system-associated protein Csm6 6H domainF: UNK_F_TYPEECOD (1.6)
BUNK_F_TYPEe5yjcB1 A: alpha bundlesX: Four-helical up-and-down bundleH: HEPNT: Nucleotidyltransferase substrate binding subunit/domainF: UNK_F_TYPEECOD (1.6)
BUNK_F_TYPEe5yjcB2 A: alpha bundlesX: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)H: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)T: CRISPR/Cas system-associated protein Csm6 6H domainF: UNK_F_TYPEECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF09659Cas_Csm6 HEPN domain (Cas_Csm6_HEPN)Cas_Csm6 HEPN domainThis entry represents the HEPN domain of Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix domain and a C-terminal HEPN dom ...Domain
A, B
PF22206CRISPR-associated protein Csm6 6H domain (Cas_Csm6_6H)CRISPR-associated protein Csm6 6H domainThis entry includes Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix (6H) domain and a C-terminal HEPN domain at the C-ter ...Domain

InterPro: Protein Family Classification InterPro Database Homepage