7DWX

Conformation 1 of S-ACE2-B0AT1 ternary complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyMetalloproteases (zincins), catalytic domain 8037105 3001975 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyMetalloproteases (zincins), catalytic domain 8037105 3001975 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySARS coronavirus receptor-binding domain-like 8092467 3001706 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCoronavirus spike S2 glycoprotein connector domain-like 8092473 3002562 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCoronavirus S1 glycoprotein, domain C-like 8092661 3002615 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8092469 3000120 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCoronavirus S2 glycoprotein stalk-like 8092471 3000282 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCoronavirus S1 glycoprotein, domain C-like 8092661 3002615 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCoronavirus S2 glycoprotein stalk-like 8092471 3000282 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySARS coronavirus receptor-binding domain-like 8092467 3001706 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCoronavirus spike S2 glycoprotein connector domain-like 8092473 3002562 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8092469 3000120 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8092469 3000120 SCOP2B (2022-06-29)
GSCOP2B SuperfamilySARS coronavirus receptor-binding domain-like 8092467 3001706 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCoronavirus S1 glycoprotein, domain C-like 8092661 3002615 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCoronavirus spike S2 glycoprotein connector domain-like 8092473 3002562 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCoronavirus S2 glycoprotein stalk-like 8092471 3000282 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyCoronavirus spike S2 glycoprotein connector domain-like 8092473 3002562 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyCoronavirus S1 glycoprotein, domain C-like 8092661 3002615 SCOP2B (2022-06-29)
HSCOP2B SuperfamilySARS coronavirus receptor-binding domain-like 8092467 3001706 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8092469 3000120 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyCoronavirus S2 glycoprotein stalk-like 8092471 3000282 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8092469 3000120 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyCoronavirus S1 glycoprotein, domain C-like 8092661 3002615 SCOP2B (2022-06-29)
ISCOP2B SuperfamilySARS coronavirus receptor-binding domain-like 8092467 3001706 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyCoronavirus spike S2 glycoprotein connector domain-like 8092473 3002562 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyCoronavirus S2 glycoprotein stalk-like 8092471 3000282 SCOP2B (2022-06-29)
JSCOP2B SuperfamilySARS coronavirus receptor-binding domain-like 8092467 3001706 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyCoronavirus S1 glycoprotein, domain C-like 8092661 3002615 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyCoronavirus spike S2 glycoprotein connector domain-like 8092473 3002562 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyCoronavirus S2 glycoprotein stalk-like 8092471 3000282 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8092469 3000120 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CSNFe7dwxC1 A: alpha complex topologyX: Sodium:neurotransmitter symporter family (SNF)-like (From Topology)H: Sodium:neurotransmitter symporter family (SNF)-like (From Topology)T: Sodium:neurotransmitter symporter family (SNF)-likeF: SNFECOD (1.6)
ASNFe7dwxA1 A: alpha complex topologyX: Sodium:neurotransmitter symporter family (SNF)-like (From Topology)H: Sodium:neurotransmitter symporter family (SNF)-like (From Topology)T: Sodium:neurotransmitter symporter family (SNF)-likeF: SNFECOD (1.6)
ESpike_NTDe7dwxE1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: Spike_NTDECOD (1.6)
ESpike_rec_bind_1e7dwxE4 A: beta complex topologyX: Beta domain of coronavirus spike glycoprotein (From Topology)H: Beta domain of coronavirus spike glycoprotein (From Topology)T: Beta domain of coronavirus spike glycoproteinF: Spike_rec_bind_1ECOD (1.6)
ESpike_rec_binde7dwxE3 A: a+b three layersX: Coronavirus spike protein receptor-binding domain (From Homology)H: Coronavirus spike protein receptor-binding domainT: Beta-coronavirus spike protein receptor-binding domainF: Spike_rec_bindECOD (1.6)
ECorona_S2e7dwxE2 A: a+b complex topologyX: S2 subunit of coronavirus spike glycoprotein (From Topology)H: S2 subunit of coronavirus spike glycoprotein (From Topology)T: S2 subunit of coronavirus spike glycoproteinF: Corona_S2ECOD (1.6)
FSpike_NTDe7dwxF4 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: Spike_NTDECOD (1.6)
FSpike_rec_bind_1e7dwxF2 A: beta complex topologyX: Beta domain of coronavirus spike glycoprotein (From Topology)H: Beta domain of coronavirus spike glycoprotein (From Topology)T: Beta domain of coronavirus spike glycoproteinF: Spike_rec_bind_1ECOD (1.6)
FSpike_rec_binde7dwxF3 A: a+b three layersX: Coronavirus spike protein receptor-binding domain (From Homology)H: Coronavirus spike protein receptor-binding domainT: Beta-coronavirus spike protein receptor-binding domainF: Spike_rec_bindECOD (1.6)
FCorona_S2e7dwxF1 A: a+b complex topologyX: S2 subunit of coronavirus spike glycoprotein (From Topology)H: S2 subunit of coronavirus spike glycoprotein (From Topology)T: S2 subunit of coronavirus spike glycoproteinF: Corona_S2ECOD (1.6)
GSpike_NTDe7dwxG3 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: Spike_NTDECOD (1.6)
GSpike_rec_bind_1e7dwxG2 A: beta complex topologyX: Beta domain of coronavirus spike glycoprotein (From Topology)H: Beta domain of coronavirus spike glycoprotein (From Topology)T: Beta domain of coronavirus spike glycoproteinF: Spike_rec_bind_1ECOD (1.6)
GSpike_rec_binde7dwxG4 A: a+b three layersX: Coronavirus spike protein receptor-binding domain (From Homology)H: Coronavirus spike protein receptor-binding domainT: Beta-coronavirus spike protein receptor-binding domainF: Spike_rec_bindECOD (1.6)
GCorona_S2e7dwxG1 A: a+b complex topologyX: S2 subunit of coronavirus spike glycoprotein (From Topology)H: S2 subunit of coronavirus spike glycoprotein (From Topology)T: S2 subunit of coronavirus spike glycoproteinF: Corona_S2ECOD (1.6)
HSpike_NTDe7dwxH1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: Spike_NTDECOD (1.6)
HSpike_rec_bind_1e7dwxH2 A: beta complex topologyX: Beta domain of coronavirus spike glycoprotein (From Topology)H: Beta domain of coronavirus spike glycoprotein (From Topology)T: Beta domain of coronavirus spike glycoproteinF: Spike_rec_bind_1ECOD (1.6)
HSpike_rec_binde7dwxH4 A: a+b three layersX: Coronavirus spike protein receptor-binding domain (From Homology)H: Coronavirus spike protein receptor-binding domainT: Beta-coronavirus spike protein receptor-binding domainF: Spike_rec_bindECOD (1.6)
HCorona_S2e7dwxH3 A: a+b complex topologyX: S2 subunit of coronavirus spike glycoprotein (From Topology)H: S2 subunit of coronavirus spike glycoprotein (From Topology)T: S2 subunit of coronavirus spike glycoproteinF: Corona_S2ECOD (1.6)
ISpike_NTDe7dwxI2 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: Spike_NTDECOD (1.6)
ISpike_rec_bind_1e7dwxI4 A: beta complex topologyX: Beta domain of coronavirus spike glycoprotein (From Topology)H: Beta domain of coronavirus spike glycoprotein (From Topology)T: Beta domain of coronavirus spike glycoproteinF: Spike_rec_bind_1ECOD (1.6)
ISpike_rec_binde7dwxI3 A: a+b three layersX: Coronavirus spike protein receptor-binding domain (From Homology)H: Coronavirus spike protein receptor-binding domainT: Beta-coronavirus spike protein receptor-binding domainF: Spike_rec_bindECOD (1.6)
ICorona_S2e7dwxI1 A: a+b complex topologyX: S2 subunit of coronavirus spike glycoprotein (From Topology)H: S2 subunit of coronavirus spike glycoprotein (From Topology)T: S2 subunit of coronavirus spike glycoproteinF: Corona_S2ECOD (1.6)
JSpike_NTDe7dwxJ3 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: Spike_NTDECOD (1.6)
JSpike_rec_bind_1e7dwxJ2 A: beta complex topologyX: Beta domain of coronavirus spike glycoprotein (From Topology)H: Beta domain of coronavirus spike glycoprotein (From Topology)T: Beta domain of coronavirus spike glycoproteinF: Spike_rec_bind_1ECOD (1.6)
JSpike_rec_binde7dwxJ1 A: a+b three layersX: Coronavirus spike protein receptor-binding domain (From Homology)H: Coronavirus spike protein receptor-binding domainT: Beta-coronavirus spike protein receptor-binding domainF: Spike_rec_bindECOD (1.6)
JCorona_S2e7dwxJ4 A: a+b complex topologyX: S2 subunit of coronavirus spike glycoprotein (From Topology)H: S2 subunit of coronavirus spike glycoprotein (From Topology)T: S2 subunit of coronavirus spike glycoproteinF: Corona_S2ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF00209Sodium:neurotransmitter symporter family (SNF)Sodium:neurotransmitter symporter family- Family
B, D
PF16959Renal amino acid transporter (Collectrin)Renal amino acid transporterCollectrin is a single-pass transmembrane protein that is homologous to the C-terminal region of human angiotensin-converting enzyme 2, ACE2, SwissProt:Q9BYF1, found in Peptidase_M2 Pfam:PF01401 [1]. Collectrin is critical for normal amino acid reabs ...Domain
E, F, G, H, I
PF01601Coronavirus spike glycoprotein S2 (CoV_S2)Coronavirus spike glycoprotein S2- Family
E, F, G, H, I
PF16451Betacoronavirus-like spike glycoprotein S1, N-terminal (bCoV_S1_N)Betacoronavirus-like spike glycoprotein S1, N-terminalThis entry represents the N-terminal domain of the betacoronavirus-like trimeric spike glycoprotein. The distal S1 subunit of the coronavirus spike protein is responsible for receptor binding. S1 contains two domains; an N-terminal galectin-like doma ...Domain
E, F, G, H, I
PF09408Betacoronavirus spike glycoprotein S1, receptor binding (bCoV_S1_RBD)Betacoronavirus spike glycoprotein S1, receptor bindingThis entry represents the receptor binding domain (S1 RBD) of the betacoronavirus spike glycoprotein. The spike glycoprotein is arranged in trimers on the surface of the viral membrane and is essential for viral entry. The spike protein is translat ...Domain
E, F, G, H, I
PF19209Coronavirus spike glycoprotein S1, C-terminal (CoV_S1_C)Coronavirus spike glycoprotein S1, C-terminalThis entry represents a domain found at the C-terminus of the Coronavirus S1 protein. It is found across a range of alpha, beta and gamma coronaviruses. This small all beta stranded domain is known as subdomain 2 in the structure of the porcine epide ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
Sodium-dependent neutral amino acid transporter B(0)AT1
B, D
Angiotensin-converting enzyme 2
E, F, G, H, I
Spike glycoprotein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C
IPR000175Sodium:neurotransmitter symporterFamily
A, C
IPR002438Neutral amino acid SLC6 transporterFamily
A, C
IPR037272Sodium:neurotransmitter symporter superfamilyHomologous Superfamily
B, D
IPR031588Collectrin domainDomain
B, D
IPR001548Peptidase M2, peptidyl-dipeptidase AFamily
E, F, G, H, I
IPR044873Spike glycoprotein S2, coronavirus, heptad repeat 1Domain
E, F, G, H, I
IPR044366Spike (S) protein S1 subunit, receptor-binding domain, SARS-CoV-2Domain
E, F, G, H, I
IPR018548Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirusDomain
E, F, G, H, I
IPR044341Spike (S) protein S1 subunit, N-terminal domain, SARS-CoV-likeDomain
E, F, G, H, I
IPR032500Spike glycoprotein S1, N-terminal domain, betacoronavirus-likeDomain
E, F, G, H, I
IPR042578Spike glycoprotein, betacoronavirusFamily
E, F, G, H, I
IPR036326Spike S1 subunit, receptor binding domain superfamily, betacoronavirusHomologous Superfamily
E, F, G, H, I
IPR043002Spike glycoprotein, N-terminal domain superfamilyHomologous Superfamily
E, F, G, H, I
IPR044874Spike glycoprotein S2, coronavirus, heptad repeat 2Domain
E, F, G, H, I
IPR043473Spike glycoprotein S2 superfamily, coronavirusHomologous Superfamily
E, F, G, H, I
IPR043607Coronavirus spike glycoprotein S1, C-terminalDomain
E, F, G, H, I
IPR002552Spike glycoprotein S2, coronavirusDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, C
PharosQ695T7
B, D
PharosQ9BYF1