7ZNN
Cryo-EM structure of RCMV-E E27 bound to human DDB1 (deltaBPB) and full-length rat STAT2
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | CPSF_A_N | e7znnA3 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: CPSF_A_N | ECOD (1.6) |
A | MMS1_N_N | e7znnA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: MMS1_N_N | ECOD (1.6) |
A | CPSF_A_C | e7znnA2 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: CPSF_A_C | ECOD (1.6) |
C [auth D] | STAT_bind_N | e7znnD2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: STAT_bind_N | ECOD (1.6) |
C [auth D] | STAT_bind_C | e7znnD1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: STAT_bind_C | ECOD (1.6) |
C [auth D] | STAT_alpha | e7znnD3 | A: alpha bundles | X: STAT-like | H: STAT (From Topology) | T: STAT | F: STAT_alpha | ECOD (1.6) |
C [auth D] | SH2 | e7znnD4 | A: a+b two layers | X: SH2 (From Topology) | H: SH2 (From Topology) | T: SH2 | F: SH2 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF10433 | RSE1/DDB1/CPSF1 first beta-propeller (Beta-prop_RSE1_1st) | RSE1/DDB1/CPSF1 first beta-propeller | - | Repeat | |
PF03178 | CPSF A subunit region (CPSF_A) | CPSF A subunit region | - | Repeat | |
PF05999 | Herpesvirus U5-like family (Herpes_U5) | Herpesvirus U5-like family | - | Family | |
C [auth D] | PF00017 | SH2 domain (SH2) | SH2 domain | Domain | |
C [auth D] | PF21354 | Signal transducer and activator of transcription, linker domain (STAT_linker) | Signal transducer and activator of transcription, linker domain | This domain is found in Signal transducer and activator of transcription proteins (STAT) from animals. These proteins are activated in response to extracellular signals such as cytokines, growth factors and hormonal factors and translocate to the nuc ... | Domain |
C [auth D] | PF01017 | STAT transcription factor, coiled-coil domain (STAT_alpha) | STAT transcription factor, coiled-coil domain | STAT proteins (Signal Transducers and Activators of Transcription) are a family of transcription factors that are specifically activated to regulate gene transcription when cells encounter cytokines and growth factors. STATs share 6 structurally and ... | Domain |
C [auth D] | PF02864 | STAT protein, DNA binding domain (STAT_bind) | STAT protein, DNA binding domain | STAT proteins (Signal Transducers and Activators of Transcription) are a family of transcription factors that are specifically activated to regulate gene transcription when cells encounter cytokines and growth factors. This family represents the DNA ... | Domain |