1DDM
SOLUTION STRUCTURE OF THE NUMB PTB DOMAIN COMPLEXED TO A NAK PEPTIDE
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_15N-SEPARATED_NOESY | 1MM PTB U-15N; 1MM NAK NA; 50MM PHOSPHATE BUFFER NA | 50mM | 6.00 | 1 atm | 303 | ||
| 2 | 2D_13C-HSQC | 1MM PTB U-15N, 10% 13C; 1MM NAK NA; 50MM PHOSPHATE BUFFER NA | 50mM | 6.00 | 1 atm | 303 | ||
| 3 | 3D_15N/13C-SEPARATED_NOESY | 1MM PTB U-15N, U-13C; 1MM NAK NA; 50MM PHOSPHATE BUFFER NA | 50mM | 6.00 | 1 atm | 303 | ||
| 4 | HNCO/CBCACONNH/HAHBCBCACONNH/HNCACB/CCCTOCSYCONNH/HCCTOCSYCONNH/HCCHTOCSY/HALF- FILTER-NOESY | 1MM PTB U-15N, U-13C; 1MM NAK NA; 50MM PHOSPHATE BUFFER NA | 50mM | 6.00 | 1 atm | 303 | ||
| 5 | 2D TOCSY | 1MM PTB NA; 1MM NAK (G1 F2 F7 F10) 15N, 13C;; 50MM PHOSPHATE BUFFER NA | 50mM | 6.00 | 1 atm | 303 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | UNITYPLUS | 500 |
| 2 | Varian | UNITYPLUS | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| TORSION ANGLE DYNAMICS USING ARIA PROTOCOLS FOR AMBIGUOUS RESTRAINTS | THE STRUCTURES ARE BASED ON A TOTAL OF 2088 NOE, 50 DISTANCE RETRAINTS FORM HYDROGEN BONDS, 94 CHEMICAL SHIFT-DERIVED DIHEDRAL RESTRAINTS | VNMR |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | STRUCTURES WITH THE LEAST RESTRAINT VIOLATIONS,STRUCTURES WITH THE LOWEST ENERGY |
| Conformers Calculated Total Number | 150 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Additional NMR Experimental Information | |
|---|---|
| Details | THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY. |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | VNMR | 4 | VARIAN INC. |
| 2 | processing | NMRPipe | 1.7 | F. DELAGLIO |
| 3 | data analysis | NMRView | 3.1 | B. A. JOHNSON |
| 4 | refinement | CNS | 0.3 | BRUNGER |
| 5 | structure solution | CNS | 0.3 | BRUNGER |
