1HBW
Solution nmr structure of the dimerization domain of the yeast transcriptional activator Gal4 (residues 50-106)
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY (1H | 50 MM SODIUM PHOSPHATE | 7.4 | 308 | ||||
2 | 13C | 50 MM SODIUM PHOSPHATE | 7.4 | 308 | ||||
3 | 15N) | 50 MM SODIUM PHOSPHATE | 7.4 | 308 | ||||
4 | HNHA | 50 MM SODIUM PHOSPHATE | 7.4 | 308 | ||||
5 | HNHB | 50 MM SODIUM PHOSPHATE | 7.4 | 308 | ||||
6 | HNCA | 50 MM SODIUM PHOSPHATE | 7.4 | 308 | ||||
7 | HN(CO)CA | 50 MM SODIUM PHOSPHATE | 7.4 | 308 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UP 750 | 750 |
2 | Bruker | UP 400 | 600 |
3 | Bruker | AMX | 500 |
4 | Bruker | AMX | 400 |
5 | Varian | INOVA | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
SIMULATED ANNEALING PROTOCOL | C2 SYMMETRY WAS ENFORCED IN THE STRUCTURE CALCULATIONS. | CNS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | LOWEST ENERGY AND MINIMAL NOE DERIVED DISTANCE RESTRAINTS VIOLATIONS |
Conformers Calculated Total Number | 300 |
Conformers Submitted Total Number | 17 |
Representative Model | 1 (n/a) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | CNS | BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, RICE,SIMONSON,WARREN | |
2 | structure solution | CNS |