1I1S
SOLUTION STRUCTURE OF THE TRANSCRIPTIONAL ACTIVATION DOMAIN OF THE BACTERIOPHAGE T4 PROTEIN MOTA
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 2mM MotNF U-15N | 200 mM potassium phosphate buffer, pH 6.5; 90% H2O, 10% D2O | 200 mM potassium phosphate | 6.5 | ambient | 301 | |
2 | 3D_13C-separated_NOESY | 2mM MotNF U-13C,15N | 200 mM potassium phosphate buffer, pH 6.5; 90% H2O, 10% D2O | 200 mM potassium phosphate | 6.5 | ambient | 301 | |
3 | HNHA | 2mM MotNF U-15N | 200 mM potassium phosphate buffer, pH 6.5; 90% H2O, 10% D2O | 200 mM potassium phosphate | 6.5 | ambient | 301 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing, molecular dynamics, torsion angle dynamics | the structures are based on 3186 NOE-derived distance constraints, 64 dihedral angle restraints, 152 distance restraints from hydrogen bonds. | Felix |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | Felix | 98 | MSI |
2 | data analysis | Felix | 98 | MSI |
3 | structure solution | X-PLOR | 98 | Brunger |
4 | refinement | X-PLOR | 98 | Brunger |