1B5B
RAT FERROCYTOCHROME B5 B CONFORMATION, NMR, 1 STRUCTURE
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | [U-13C; U-15N] Cytochrome b5, 100 mM phosphate buffer, 0.5 mM TSP, pH 7.0 | 90% H2O/10% D2O | 100 mM | 7.0 | ambient | 313 | |
2 | DQF-COSY | [U-13C; U-15N] Cytochrome b5, 100 mM phosphate buffer, 0.5 mM TSP, pH 7.0 | 90% H2O/10% D2O | 100 mM | 7.0 | ambient | 313 | |
3 | TOCSY | [U-13C; U-15N] Cytochrome b5, 100 mM phosphate buffer, 0.5 mM TSP, pH 7.0 | 90% H2O/10% D2O | 100 mM | 7.0 | ambient | 313 | |
4 | N15 3D NOESY-HMQC | [U-13C; U-15N] Cytochrome b5, 100 mM phosphate buffer, 0.5 mM TSP, pH 7.0 | 90% H2O/10% D2O | 100 mM | 7.0 | ambient | 313 | |
5 | N15 3D TOCSY-HMQC | [U-13C; U-15N] Cytochrome b5, 100 mM phosphate buffer, 0.5 mM TSP, pH 7.0 | 90% H2O/10% D2O | 100 mM | 7.0 | ambient | 313 | |
6 | 3D HCCH-TOCSY | [U-13C; U-15N] Cytochrome b5, 100 mM phosphate buffer, 0.5 mM TSP, pH 7.0 | 90% H2O/10% D2O | 100 mM | 7.0 | ambient | 313 | |
7 | HNCO | [U-13C; U-15N] Cytochrome b5, 100 mM phosphate buffer, 0.5 mM TSP, pH 7.0 | 90% H2O/10% D2O | 100 mM | 7.0 | ambient | 313 | |
8 | CBCA(CO)NH | [U-13C; U-15N] Cytochrome b5, 100 mM phosphate buffer, 0.5 mM TSP, pH 7.0 | 90% H2O/10% D2O | 100 mM | 7.0 | ambient | 313 | |
9 | HSQC | [U-13C; U-15N] Cytochrome b5, 100 mM phosphate buffer, 0.5 mM TSP, pH 7.0 | 90% H2O/10% D2O | 100 mM | 7.0 | ambient | 313 | |
10 | HCACO< HNHA | [U-13C; U-15N] Cytochrome b5, 100 mM phosphate buffer, 0.5 mM TSP, pH 7.0 | 90% H2O/10% D2O | 100 mM | 7.0 | ambient | 313 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX | 600 |
2 | Varian | UNITYPLUS | 500 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry | DIANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | CLOSEST TO THE AVERAGE STRUCTURE, LOW TARGET FUNCTION |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 1 |
Representative Model | 1 (closest to the average structure, low target function) |
Additional NMR Experimental Information | |
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Details | THIS STRUCTURE REPRESENTS THE A CONFORMATION OF THE RAT FERROCYTOCHROME B5. IT IS THE STRUCTURE CLOSEST TO THE AVERAGE AS ANALYZED BY X-PLOR. 200 STRUCTURES WERE CALCULATED USING DIANA 2.1 AND ONE STRUCTURE WAS CHOSEN TO REPRESENT THE FINAL RESULTS. THE STRUCTURE WAS DETERMINED USING 2D AND 3D EXPERIMENTS INCLUDING DISTANCE AND ANGULAR RESTRAINTS FROM HNHA. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | DIANA | 2.1 | WUTHRICH |
2 | structure calculation | DIANA | 2.1 | WUTHRICH |
3 | refinement | X-PLOR | ||
4 | data analysis | X-PLOR |