2LNS
Solution structure of AGR2 residues 41-175
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-13C; U-15N; U-2H] AGR2 | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
2 | 2D 1H-13C HSQC | 1 mM [U-15N; Iled1-[13CH3]; Leu,Val-[13CH3]] AGR2 | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
3 | 3D HN(COCA)CB | 1 mM [U-13C; U-15N; U-2H] AGR2 | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
4 | 3D HNCO | 1 mM [U-13C; U-15N; U-2H] AGR2 | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
5 | 3D HNCA | 1 mM [U-13C; U-15N; U-2H] AGR2 | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
6 | 3D HNCACB | 1 mM [U-13C; U-15N; U-2H] AGR2 | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
7 | 3D HN(CO)CA | 1 mM [U-13C; U-15N; U-2H] AGR2 | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
8 | 2D 1H-15N HSQC | 1 mM [U-15N; Iled1-[13CH3]; Leu,Val-[13CH3]] AGR2 | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
9 | 3D 1H-15N NOESY | 1 mM [U-15N; Iled1-[13CH3]; Leu,Val-[13CH3]] AGR2 | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
10 | 3D 1H-13C NOESY | 1 mM [U-15N; Iled1-[13CH3]; Leu,Val-[13CH3]] AGR2 | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
11 | IPAP | 1 mM [U-15N] AGR2, 10 mg Pf1 phage | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
12 | IPAP | 1 mM [U-15N] AGR2, 5 % PEG:Hexanol | PEG | 0.1 | 6.5 | ambient | 298 | |
13 | 3D HN(CA)CO | 1 mM [U-13C; U-15N; U-2H] AGR2 | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CNSSOLVE |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 300 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CNSSOLVE | Brunger, Adams, Clore, Gros, Nilges and Read | |
2 | refinement | CNSSOLVE | Brunger, Adams, Clore, Gros, Nilges and Read | |
3 | peak picking | Analysis | CCPN | |
4 | chemical shift assignment | Analysis | CCPN | |
5 | collection | TopSpin | Bruker Biospin | |
6 | processing | TopSpin | Bruker Biospin |