2LNT
Solution structure of E60A mutant AGR2
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
2 | 2D 1H-13C HSQC | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
3 | 3D HNCA | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
4 | 3D HN(CO)CA | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
5 | 3D HNCACB | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
6 | 3D CBCA(CO)NH | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
7 | 3D HNCO | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
8 | 3D 1H-13C NOESY | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
9 | 3D 1H-15N NOESY | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
10 | 3D HN(CA)CO | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
11 | IPAP | 0.3 mM [U-15N] AGR2 E60A, 10 mg Pf1 phage | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
12 | 3D HBHA(CO)NH | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 | |
13 | 3D HBHANH | 0.3 mM [U-13C; U-15N] AGR2 E60A | 90% H2O/10% D2O | 0.1 | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing, refinement | CNSSOLVE |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CNSSOLVE | Brunger, Adams, Clore, Gros, Nilges and Read | |
2 | peak picking | Analysis | CCPN | |
3 | chemical shift assignment | Analysis | CCPN | |
4 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
5 | collection | TopSpin | Bruker Biospin | |
6 | processing | TopSpin | Bruker Biospin | |
7 | refinement | CNSSOLVE | Brunger, Adams, Clore, Gros, Nilges and Read |