2DO8
Solution Structure of UPF0301 protein HD_1794
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | GFT (4,3)D HNNCABCA | 50mM MES; 10mM DTT; 50mM Arginine; 0.02% NaN3; 95% H2O, 5% D2O | 95% H2O/5% D2O | 6.0 | ambient | 298 | ||
2 | GFT (4,3)D CABCA(CO)NHN | 50mM MES; 10mM DTT; 50mM Arginine; 0.02% NaN3; 95% H2O, 5% D2O | 95% H2O/5% D2O | 6.0 | ambient | 298 | ||
3 | GFT (4,3)D HABCAB(CO)NHN | 50mM MES; 10mM DTT; 50mM Arginine; 0.02% NaN3; 95% H2O, 5% D2O | 95% H2O/5% D2O | 6.0 | ambient | 298 | ||
4 | GFT (4,3)D HCCH | 50mM MES; 10mM DTT; 50mM Arginine; 0.02% NaN3; 95% H2O, 5% D2O | 95% H2O/5% D2O | 6.0 | ambient | 298 | ||
5 | SIMULTANEOUS HETERONUCLEAR RESOLVED [1H,1H]-NOESY | 50mM MES; 10mM DTT; 50mM Arginine; 0.02% NaN3; 95% H2O, 5% D2O | 95% H2O/5% D2O | 6.0 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
2 | Varian | INOVA | 750 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
distance geometry, simulated annealing, molecular dynamics, torsion angle dynamics | DYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
---|---|
Details | This structure was determined using GFT techniques. |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | DYANA | 1.5 | Guntert, P. |
2 | structure solution | CYANA | 2.1 | Guntert, P. |
3 | processing | NMRPipe | 2.3 | Delaglio, F. |
4 | refinement | CNS | 1.1 | |
5 | data analysis | XEASY | 1.3 | Bartels, C., Xia, T. |
6 | data analysis | UBNMR | 1.0 | Shen, Y. |
7 | data analysis | AutoStructure | 2.0.0 | Huang, Y.J. |