2KNH
The Solution structure of the eTAFH domain of AML1-ETO complexed with HEB peptide
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 25 mM Bis-Tris, 1 mM EDTA, 350 mM sodium chloride | 95% H2O/5% D2O | 350 | 6 | ambient | 303 | |
2 | 2D 1H-13C HSQC | 25 mM Bis-Tris, 1 mM EDTA, 350 mM sodium chloride | 95% H2O/5% D2O | 350 | 6 | ambient | 303 | |
3 | 3D CBCA(CO)NH | 25 mM Bis-Tris, 1 mM EDTA, 350 mM sodium chloride | 95% H2O/5% D2O | 350 | 6 | ambient | 303 | |
4 | 3D HNCACB | 25 mM Bis-Tris, 1 mM EDTA, 350 mM sodium chloride | 95% H2O/5% D2O | 350 | 6 | ambient | 303 | |
5 | 3D HCCH-TOCSY | 25 mM Bis-Tris, 1 mM EDTA, 350 mM sodium chloride | 95% H2O/5% D2O | 350 | 6 | ambient | 303 | |
6 | 3D HNHA | 25 mM Bis-Tris, 1 mM EDTA, 350 mM sodium chloride | 95% H2O/5% D2O | 350 | 6 | ambient | 303 | |
7 | 3D HNCO | 25 mM Bis-Tris, 1 mM EDTA, 350 mM sodium chloride | 95% H2O/5% D2O | 350 | 6 | ambient | 303 | |
8 | 3D 1H-15N NOESY | 25 mM Bis-Tris, 1 mM EDTA, 350 mM sodium chloride | 95% H2O/5% D2O | 350 | 6 | ambient | 303 | |
9 | 3D 1H-13C NOESY | 25 mM Bis-Tris, 1 mM EDTA, 350 mM sodium chloride | 95% H2O/5% D2O | 350 | 6 | ambient | 303 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
2 | Varian | INOVA | 500 |
3 | Bruker | AVANCE | 900 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CNS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
2 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read |