8UWF
NMR structure of the funnel-web spider toxin Hc3a
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 4 mg/mL Hc3a | 90% H2O/10% D2O | 0 mM | 3.5 | 1 atm | 298 | Bruker AVANCE 900 |
2 | 2D 1H-1H NOESY | 4 mg/mL Hc3a | 90% H2O/10% D2O | 0 mM | 3.5 | 1 atm | 298 | Bruker AVANCE 900 |
3 | 2D 1H-13C HSQC | 4 mg/mL Hc3a | 90% H2O/10% D2O | 0 mM | 3.5 | 1 atm | 298 | Bruker AVANCE 900 |
4 | 2D 1H-15N HSQC | 4 mg/mL Hc3a | 90% H2O/10% D2O | 0 mM | 3.5 | 1 atm | 298 | Bruker AVANCE 900 |
5 | 2D 1H-1H TOCSY | 4 mg/mL Hc3a | 90% H2O/10% D2O | 0 mM | 3.5 | 1 atm | 288 | Bruker AVANCE 900 |
6 | 2D 1H-1H TOCSY | 4 mg/mL Hc3a | 90% H2O/10% D2O | 0 mM | 3.5 | 1 atm | 293 | Bruker AVANCE 900 |
7 | 2D 1H-1H TOCSY | 4 mg/mL Hc3a | 90% H2O/10% D2O | 0 mM | 3.5 | 1 atm | 303 | Bruker AVANCE 900 |
8 | 2D 1H-1H TOCSY | 4 mg/mL Hc3a | 90% H2O/10% D2O | 0 mM | 3.5 | 1 atm | 308 | Bruker AVANCE 900 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 900 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | Simulated annealing using torsion angle dynamics | CYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with acceptable covalent geometry |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (best molprobity score) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | CARA | Keller and Wuthrich | |
2 | peak picking | CARA | Keller and Wuthrich | |
3 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
5 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich | |
4 | data analysis | MolProbity | Richardson |