PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE

PL9 is a Ligand Of Interest in 4IXQ designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IXQ_PL9_D_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IXQ_PL9_D_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IXQ_PL9_D_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4IXQ_PL9_D_404 10% 27% 0.3 0.8041.22 1.7 8 20 00100%1
4IXQ_PL9_d_404 5% 27% 0.314 0.7281.25 1.68 9 1600100%1
4IXQ_PL9_a_410 4% 28% 0.349 0.7621.23 1.66 7 120082%1
4IXQ_PL9_A_408 1% 28% 0.461 0.7251.28 1.58 7 140082%1
4IXQ_PL9_j_101 0% 30% 0.463 0.341 1.18 1.6 5 90064%1
4IXQ_PL9_J_101 0% 30% 0.524 0.304 1.19 1.59 5 80064%1
5WS6_PL9_D_405 97% 37% 0.055 0.9670.69 1.76 2 21 00100%1
5B5E_PL9_d_406 96% 33% 0.054 0.9651.05 1.59 4 1200100%1
5GTI_PL9_d_405 96% 36% 0.053 0.9620.64 1.86 2 22 00100%1
5V2C_PL9_d_407 96% 34% 0.069 0.9781.27 1.32 8 1000100%1
5B66_PL9_D_412 93% 35% 0.077 0.971.06 1.51 3 1200100%1
1VF5_PL9_Q_1305 98% 4% 0.062 0.9843.4 2.39 21 16320100%1