AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER

AGS is a Ligand Of Interest in 5GRB designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5GRB_AGS_E_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5GRB_AGS_E_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5GRB_AGS_E_401 57% 39% 0.142 0.9170.72 1.63 1 330100%1
5GRB_AGS_A_401 39% 34% 0.193 0.8990.8 1.79 1 580100%0.86
5GRB_AGS_F_401 38% 42% 0.185 0.8860.69 1.52 1 250100%1
5GRB_AGS_B_401 36% 59% 0.188 0.8830.68 0.89 1 240100%1
5GRB_AGS_C_401 19% 50% 0.291 0.8870.7 1.21 1 250100%0.72
5GRB_AGS_D_401 15% 59% 0.31 0.8720.55 0.99 - 250100%1
6QV1_AGS_B_600 100% 67% 0.042 0.9950.58 0.7 - 100100%1
3ZEU_AGS_E_1341 99% 20% 0.047 0.9751.9 1.51 6 300100%0.73
9EPN_AGS_A_501 99% 50% 0.054 0.9810.85 1.09 1 210100%1
8ROK_AGS_A_2001 98% 4% 0.057 0.9794.45 1.4 9 330100%1
5DA9_AGS_A_1402 98% 58% 0.051 0.9710.67 0.92 - 140100%1