PRD_000200

Nisin A

Created:2012-02-03
Last modified:  2023-09-20

PRD_000200 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 1WCO.

Chemical Details

Formal Charge0
Atom Count460
Chiral Atom Count31
Bond Count466
Aromatic Bond Count5
Toggle HydrogenToggle Labels

Chemical Component Summary

NameNisin A
Systematic Name (OpenEye OEToolkits)[(5S)-5-[2-[[(2S)-2-[[(2S)-2-[[(2S,3S)-2-[[(2S)-2-[[(1R,4S,7R,11S,14S,17S)-17-[[(2S)-6-azaniumyl-2-[[(2S)-2-[[(2S)-2-[[(3R,9S,12S,15S,21S)-21-[[(2S)-6-azaniumyl-2-[[(3S,7R,13S)-3-[[(3R,6S,12S,15S)-15-[[(Z)-2-[[(2S,3S)-2-azanyl-3-methyl-pentanoyl]amino]but-2-enoyl]amino]-12-[(2S)-butan-2-yl]-9-methylidene-6-(2-methylpropyl)-5,8,11,14-tetrakis(oxidanylidene)-1-thia-4,7,10,13-tetrazacyclohexadec-3-yl]carbonylamino]-4-methyl-2,9,12-tris(oxidanylidene)-5-thia-1,8,11-triazabicyclo[11.3.0]hexadecan-7-yl]carbonylamino]hexanoyl]amino]-15,22-dimethyl-12-(2-methylpropyl)-9-(2-methylsulfanylethyl)-5,8,11,14,17,20-hexakis(oxidanylidene)-1-thia-4,7,10,13,16,19-hexazacyclodocos-3-yl]carbonylamino]-4-azanyl-4-oxidanylidene-butanoyl]amino]-4-methylsulfanyl-butanoyl]amino]hexanoyl]amino]-4-(2-azanyl-2-oxidanylidene-ethyl)-10,14,18-trimethyl-2,5,13,16,22-pentakis(oxidanylidene)-9,19-dithia-3,6,12,15,21-pentazabicyclo[9.9.2]docosan-7-yl]carbonylamino]-3-oxidanyl-propanoyl]amino]-3-methyl-pentanoyl]amino]-3-(1H-imidazol-3-ium-4-yl)propanoyl]amino]-3-methyl-butanoyl]amino]prop-2-enoylamino]-6-oxidanyl-6-oxidanylidene-hexyl]azanium
FormulaC141 H233 N41 O38 S7
Molecular Weight3,335.066
TypePEPTIDE-LIKE

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESCACTVS3.370CC[CH](C)[CH](N)C(=O)NC(=CC)C(=O)N[CH]1CSC[CH](NC(=O)[CH](CC(C)C)NC(=O)C(=C)NC(=O)[CH](NC1=O)[CH](C)CC)C(=O)N[CH]2[CH](C)SC[CH](NC(=O)CNC(=O)[CH]3CCCN3C2=O)C(=O)N[CH](CCCC[NH3+])C(=O)N[CH]4[CH](C)SC[CH](NC(=O)CNC(=O)[CH](CCSC)NC(=O)[CH](CC(C)C)NC(=O)[CH](C)NC(=O)CNC4=O)C(=O)N[CH](CC(N)=O)C(=O)N[CH](CCSC)C(=O)N[CH](CCCC[NH3+])C(=O)N[CH]5[CH](C)SC[CH]6NC(=O)[CH](NC(=O)[CH](C)NC5=O)[CH](C)SC[CH](NC(=O)[CH](CC(N)=O)NC6=O)C(=O)N[CH](CO)C(=O)N[CH]([CH](C)CC)C(=O)N[CH](Cc7c[nH]c[nH+]7)C(=O)N[CH](C(C)C)C(=O)NC(=C)C(=O)N[CH](CCCC[NH3+])C(O)=O
SMILESOpenEye OEToolkits1.7.6CCC(C)C1C(=O)NC(=C)C(=O)NC(C(=O)NC(CSCC(C(=O)N1)NC(=O)C(=CC)NC(=O)C(C(C)CC)N)C(=O)NC2C(SCC(NC(=O)CNC(=O)C3CCCN3C2=O)C(=O)NC(CCCC[NH3+])C(=O)NC4C(SCC(NC(=O)CNC(=O)C(NC(=O)C(NC(=O)C(NC(=O)CNC4=O)C)CC(C)C)CCSC)C(=O)NC(CC(=O)N)C(=O)NC(CCSC)C(=O)NC(CCCC[NH3+])C(=O)NC5C(SCC6C(=O)NC(C(=O)NC(CSC(C(C(=O)N6)NC(=O)C(NC5=O)C)C)C(=O)NC(CO)C(=O)NC(C(C)CC)C(=O)NC(Cc7c[nH]c[nH+]7)C(=O)NC(C(C)C)C(=O)NC(=C)C(=O)NC(CCCC[NH3+])C(=O)O)CC(=O)N)C)C)C)CC(C)C
Canonical SMILESCACTVS3.370 CC[C@H](C)[C@H](N)C(=O)N\C(=C\C)C(=O)N[C@@H]1CSC[C@H](NC(=O)[C@H](CC(C)C)NC(=O)C(=C)NC(=O)[C@@H](NC1=O)[C@@H](C)CC)C(=O)N[C@@H]2[C@@H](C)SC[C@H](NC(=O)CNC(=O)[C@@H]3CCCN3C2=O)C(=O)N[C@@H](CCCC[NH3+])C(=O)N[C@@H]4[C@@H](C)SC[C@H](NC(=O)CNC(=O)[C@H](CCSC)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](C)NC(=O)CNC4=O)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](CCSC)C(=O)N[C@@H](CCCC[NH3+])C(=O)N[C@@H]5[C@@H](C)SC[C@@H]6NC(=O)[C@H](NC(=O)[C@H](C)NC5=O)[C@@H](C)SC[C@H](NC(=O)[C@H](CC(N)=O)NC6=O)C(=O)N[C@@H](CO)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](Cc7c[nH]c[nH+]7)C(=O)N[C@@H](C(C)C)C(=O)NC(=C)C(=O)N[C@@H](CCCC[NH3+])C(O)=O
Canonical SMILESOpenEye OEToolkits1.7.6 CC[C@H](C)[C@H]1C(=O)NC(=C)C(=O)N[C@H](C(=O)N[C@@H](CSC[C@H](C(=O)N1)NC(=O)/C(=C/C)/NC(=O)[C@H]([C@@H](C)CC)N)C(=O)N[C@@H]2C(SC[C@H](NC(=O)CNC(=O)[C@@H]3CCCN3C2=O)C(=O)N[C@@H](CCCC[NH3+])C(=O)N[C@@H]4C(SC[C@H](NC(=O)CNC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)CNC4=O)C)CC(C)C)CCSC)C(=O)N[C@@H](CC(=O)N)C(=O)N[C@@H](CCSC)C(=O)N[C@@H](CCCC[NH3+])C(=O)N[C@@H]5C(SC[C@H]6C(=O)N[C@H](C(=O)N[C@@H](CSC([C@H](C(=O)N6)NC(=O)[C@@H](NC5=O)C)C)C(=O)N[C@@H](CO)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](Cc7c[nH]c[nH+]7)C(=O)N[C@@H](C(C)C)C(=O)NC(=C)C(=O)N[C@@H](CCCC[NH3+])C(=O)O)CC(=O)N)C)C)C)CC(C)C
InChIInChI1.03 InChI=1S/C141H229N41O38S7/c1-24-67(11)103(147)133(211)159-79(27-4)116(194)171-91-57-223-58-92(172-121(199)86(48-65(7)8)166-113(191)72(16)155-136(214)105(68(12)25-2)177-130(91)208)131(209)181-110-77(21)227-60-93(157-102(188)55-150-132(210)97-38-34-44-182(97)140(110)218)126(204)161-81(36-29-32-42-143)118(196)179-107-74(18)224-59-94(158-101(187)54-149-115(193)82(39-45-221-22)162-120(198)85(47-64(5)6)165-111(189)70(14)153-100(186)53-151-134(107)212)127(205)167-88(50-98(145)184)122(200)163-83(40-46-222-23)117(195)160-80(35-28-31-41-142)119(197)180-108-75(19)226-62-96-128(206)168-89(51-99(146)185)123(201)173-95(61-225-76(20)109(139(217)174-96)178-114(192)73(17)156-138(108)216)129(207)170-90(56-183)125(203)176-106(69(13)26-3)137(215)169-87(49-78-52-148-63-152-78)124(202)175-104(66(9)10)135(213)154-71(15)112(190)164-84(141(219)220)37-30-33-43-144/h27,52,63-70,73-77,80-97,103-110,183H,15-16,24-26,28-51,53-62,142-144,147H2,1-14,17-23H3,(H2,145,184)(H2,146,185)(H,148,152)(H,149,193)(H,150,210)(H,151,212)(H,153,186)(H,154,213)(H,155,214)(H,156,216)(H,157,188)(H,158,187)(H,159,211)(H,160,195)(H,161,204)(H,162,198)(H,163,200)(H,164,190)(H,165,189)(H,166,191)(H,167,205)(H,168,206)(H,169,215)(H,170,207)(H,171,194)(H,172,199)(H,173,201)(H,174,217)(H,175,202)(H,176,203)(H,177,208)(H,178,192)(H,179,196)(H,180,197)(H,181,209)(H,219,220)/p+4/b79-27+/t67-,68-,69-,70-,73-,74+,75+,76+,77+,80-,81-,82-,83-,84-,85-,86-,87-,88-,89-,90-,91+,92-,93-,94-,95-,96-,97-,103-,104-,105-,106-,107+,108+,109+,110+/m0/s1
InChIKeyInChI1.03 PWFSAVZKCGCNRK-BPOGWINFSA-R