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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Chen, Z.H."

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Search Summary

This query matches 18 Structures.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

	Homo sapiens (14)
	Escherichia coli (4)
	synthetic construct (4)
	Human immunodeficiency virus 1 (3)

Taxonomy

	Eukaryota (14)
	Bacteria (4)
	other sequences (4)
	Riboviria (3)

Experimental Method

	ELECTRON MICROSCOPY (11)
	X-RAY DIFFRACTION (5)
	ELECTRON CRYSTALLOGRAPHY (2)

Polymer Entity Type

Protein (18)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (1)
	2.5 - 3.0 (1)
	3.0 - 3.5 (3)
	3.5 - 4.0 (4)
	4.0 - 4.5 (5)
	> 4.5 (3)

Release Date

	2005 - 2009 (1)
	2015 - 2019 (8)
	2020 - 2024 (7)
	2025 - 2029 (2)

Enzyme Classification Name

Isomerases (2)

Membrane Protein Annotation

	PDBTM (10)
	OPM (7)
	MemProtMD (5)
	mpstruc (4)

Symmetry Type

	Asymmetric (8)
	Cyclic (6)
	Dihedral (5)

SCOP Classification

	All alpha proteins (3)
	All beta proteins (1)
	Alpha and beta proteins (a+b) (1)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 18 of 18 Structures

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2GSK	Download File View File

Structure of the BtuB:TonB Complex

Shultis, D.D., Purdy, M.P., Banchs, C.N., Wiener, M.C.

(2006) Science 312: 1396-1399

Released	2006-06-13
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	Vitamin B12 transporter btuB (protein) protein TONB (protein)
Unique Ligands	CA, CNC, HEX, LDA, OCT

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5ER7	Download File View File

Connexin-26 Bound to Calcium

Purdy, M.D., Bennett, B.C., Baker, K.A., Yeager, M.J.

(2016) Nat Commun 7: 8770-8770

Released	2016-01-27
Method	X-RAY DIFFRACTION 3.286 Å
Organisms	Homo sapiens
Macromolecule	Gap junction beta-2 protein (protein)
Unique Ligands	CA

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5ERA	Download File View File

Human Connexin-26 (Calcium-free)

Purdy, M.D., Bennett, B.C., Baker, K.A., Yeager, M.J.

(2016) Nat Commun 7: 8770-8770

Released	2016-01-27
Method	X-RAY DIFFRACTION 3.8 Å
Organisms	Homo sapiens
Macromolecule	Gap junction beta-2 protein (protein)

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5I4T	Download File View File

Immature hexagonal lattice of HIV-1 Gag

Pornillos, O., Wagner, J.M., Zadrozny, K., Ganser-Pornillos, B.K.

(2016) Elife 5:

Released	2016-07-27
Method	X-RAY DIFFRACTION 3.273 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	CTD-SP1 fragment of HIV-1 Gag (protein)

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6CBV	Download File View File

Crystal structure of BRIL bound to an affinity matured synthetic antibody.

Mukherjee, S., Skrobek, B., Kossiakoff, A.A.

(2020) Nat Commun 11: 1598-1598

Released	2019-02-06
Method	X-RAY DIFFRACTION 1.872 Å
Organisms	Escherichia coli Homo sapiens
Macromolecule	BRIL (protein) Heavy chain, Fab fragment (protein) Light Chain, Fab fragment (protein)
Unique Ligands	FMT, GOL, NA

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6N3J	Download File View File

MicroED Structure of the CTD-SP1 fragment of HIV-1 Gag

Purdy, M.D., Shi, D., Hattne, J., Chrustowicz, J.

(2018) Proc Natl Acad Sci U S A 115: 13258-13263

Released	2018-12-12
Method	ELECTRON CRYSTALLOGRAPHY 3 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	CTD-SP1 fragment of HIV-1 Gag (protein)

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6N3U	Download File View File

MicroED Structure of the CTD-SP1 fragment of HIV-1 Gag with bound maturation inhibitor Bevirimat.

Purdy, M.D., Shi, D., Hattne, J., Chrustowicz, J.

(2018) Proc Natl Acad Sci U S A 115: 13258-13263

Released	2018-12-12
Method	ELECTRON CRYSTALLOGRAPHY 2.9 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	CTD-SP1 fragment of HIV-1 Gag (protein)

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6PEK	Download File View File

Structure of Spastin Hexamer (Subunit A-E) in complex with substrate peptide

Han, H., Schubert, H.L., McCullough, J., Monroe, N., Sundquist, W.I., Hill, C.P.

(2020) J Biol Chem 295: 435-443

Released	2019-12-04
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Spastin (protein) substrate peptide, TYR-GLU-TYR-GLU-TYR-GLU-TYR-GLU (protein)
Unique Ligands	ADP, BEF, MG

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6PEN	Download File View File

Structure of Spastin Hexamer (whole model) in complex with substrate peptide

Han, H., Schubert, H.L., McCullough, J., Monroe, N., Sundquist, W.I., Hill, C.P.

(2020) J Biol Chem 295: 435-443

Released	2019-12-04
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	EYEYEYEYEY (protein) Spastin (protein)
Unique Ligands	ADP, BEF, MG

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6UR8	Download File View File

CryoEM structure of human alpha4beta2 nicotinic acetylcholine receptor in complex with varenicline

Alvarez, F.J.D., Mukherjee, S., Han, S., Ammirati, M., Kossiakoff, A.A.

(2020) Nat Commun 11: 1598-1598

Released	2020-04-29
Method	ELECTRON MICROSCOPY 3.71 Å
Organisms	Escherichia coli Homo sapiens
Macromolecule	Chimera of soluble cytochrome b562 (BRIL) and neuronal acetylcholine receptor subunit alpha-4 (protein) Neuronal acetylcholine receptor subunit beta-2 (protein)
Unique Ligands	BMA, NAG, QMR

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6USF	Download File View File

CryoEM structure of human alpha4beta2 nicotinic acetylcholine receptor with varenicline in complex with anti-BRIL synthetic antibody BAK5

Alvarez, F.J.D., Mukherjee, S., Han, S., Ammirati, M., Kossiakoff, A.A.

(2020) Nat Commun 11: 1598-1598

Released	2020-04-29
Method	ELECTRON MICROSCOPY 3.87 Å
Organisms	Escherichia coli Homo sapiens
Macromolecule	Fab heavy chain (protein) Fab light chain (protein) Neuronal acetylcholine receptor subunit beta-2 (protein) chimera of soluble cytochrome b562 (BRIL) and neuronal acetylcholine receptor subunit alpha-4 (protein)
Unique Ligands	BMA, NAG, QMR
Unique branched monosaccharides	BMA, NAG

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6UVR	Download File View File

Human Connexin-26 (Neutral pH open conformation)

Khan, A.K., Jagielnicki, M., Purdy, M.D., Yeager, M.

(2020) Cell Rep 31: 107482-107482

Released	2020-04-29
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Homo sapiens
Macromolecule	Gap junction beta-2 protein (protein)

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6UVS	Download File View File

Human Connexin-26 (Low pH open conformation)

Khan, A.K., Jagielnicki, M., Purdy, M.D., Yeager, M.

(2020) Cell Rep 31: 107482-107482

Released	2020-04-29
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Homo sapiens
Macromolecule	Gap junction beta-2 protein (protein)

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6UVT	Download File View File

Human Connexin-26 (Low pH closed conformation)

Khan, A.K., Jagielnicki, M., Purdy, M.D., Yeager, M.

(2020) Cell Rep 31: 1-11

Released	2020-04-29
Method	ELECTRON MICROSCOPY 7.5 Å
Organisms	Homo sapiens
Macromolecule	Gap junction beta-2 protein (protein)

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7RU6	Download File View File

Cryo-EM structure of the HIV-1 restriction factor human SERINC3

Purdy, M.D., Leonhardt, S.A., Yeager, M.

(2023) Nat Commun 14: 4368-4368

Released	2022-08-24
Method	ELECTRON MICROSCOPY 4.4 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Serine incorporator 3 (protein) SiA (protein)

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7RUG	Download File View File

Human SERINC3-DeltaICL4

Purdy, M.D., Leonhardt, S.A., Yeager, M.

(2023) Nat Commun 14: 4368-4368

Released	2022-08-24
Method	ELECTRON MICROSCOPY 4.7 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Serine incorporator 3 (protein) SiA (protein)

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9C9L	Download File View File

Cryo-EM structure of the C1q A, B-crt, C peptide assembly narrow region

Kreutzberger, M.A., Yu, L.T., Egelman, E.H., Hartgerink, J.D.

(2025) ACS Cent Sci

Released	2025-02-12
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Homo sapiens
Macromolecule	Peptide from Complement C1q subcomponent subunit A (protein) Peptide from Complement C1q subcomponent subunit B (protein) Peptide from Complement C1q subcomponent subunit C (protein)

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9C9U	Download File View File

Cryo-EM structure of the C1q A, B-crt, C peptide full assembly

Kreutzberger, M.A., Yu, L.T., Egelman, E.H., Hartgerink, J.D.

(2025) ACS Cent Sci

Released	2025-02-12
Method	ELECTRON MICROSCOPY 4.5 Å
Organisms	Homo sapiens
Macromolecule	Complement C1q subcomponent subunit A (protein) Complement C1q subcomponent subunit B (protein) Complement C1q subcomponent subunit C (protein)

1 to 18 of 18 Structures

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