Structure Determination Methodology Scientific Name of Source Organism Refinement Resolution (Å) Enzyme Classification Name Membrane Protein Annotation -- Tabular Report -- Entry IDs Create Custom Report Structure Sequence Ligand Oligosaccharide Structural Genomics Center Primary Citation Biological Details Sequence Clusters Binding Affinity Crystallization Data Collection Refinement Refinement Parameters Unit Cell NMR Representative Model NMR Spectrometer NMR Sample Conditions NMR Refinement NMR Ensemble NMR Software EM Structure
Sato, H. , Takeda, K. , Tani, K. , Hino, T. , Okada, T. , Nakasako, M. , Kamiya, N. , Kouyama, T.
(1999) Acta Crystallogr D Biol Crystallogr 55 : 1251-1256
Released 1999-04-27 Method X-RAY DIFFRACTION 3.5 Å
Organisms Macromolecule Unique Ligands DPG , RET
Takeda, K. , Matsui, Y. , Sato, H. , Hino, T. , Kanamori, E. , Okumura, H. , Yamane, T. , Iizuka, T. , Kamiya, N. , Adachi, S. , Kouyama, T.
(2004) J Mol Biol 341 : 1023
Released 2000-08-16 Method X-RAY DIFFRACTION 2.5 Å
Organisms Macromolecule Unique Ligands L1P , L2P , L3P , L4P , RET Unique branched monosaccharides GAL, GLC, MAN
Takeda, K. , Matsui, Y. , Sato, H. , Hino, T. , Kanamori, E. , Okumura, H. , Yamane, T. , Kamiya, N. , Kouyama, T.
(1998) J Mol Biol 283 : 463
Released 2000-08-16 Method X-RAY DIFFRACTION 2.5 Å
Organisms Macromolecule Unique Ligands L1P , L2P , L3P , L4P , RET Unique branched monosaccharides GAL, GLC, MAN
Kadono, S. , Sakamoto, A. , Kikuchi, Y. , Oh-Eda, M. , Yabuta, N. , Koga, T. , Hattori, K. , Shiraishi, T. , Haramura, M. , Kodama, H. , Ono, Y. , Esaki, T. , Sato, H. , Watanabe, Y. , Itoh, S. , Ohta, M. , Kozono, T.
(2005) Acta Crystallogr Sect F Struct Biol Cryst Commun 61 : 169-173
Released 2005-11-10 Method X-RAY DIFFRACTION 2.6 Å
Organisms Macromolecule Unique Ligands 3CB , BGC , CA , FUC
Kadono, S. , Sakamoto, S. , Kikuchi, Y. , Oh-Eda, M. , Yabuta, N. , Kitazawa, K. , Yoshihashi, T. , Suzuki, T. , Koga, T. , Hattori, K. , Shiraishi, T. , Kodama, M. , Haramura, H. , Ono, Y. , Esaki, T. , Sato, H. , Watanabe, Y. , Itoh, S. , Ohta, M. , Kozono, T.
(2005) Biochem Biophys Res Commun 326 : 859-865
Released 2005-11-23 Method X-RAY DIFFRACTION 2.2 Å
Organisms Macromolecule Unique Ligands 3BP , BGC , CA , FUC
Kadono, S. , Sakamoto, A. , Kikuchi, Y. , Oh-eda, M. , Yabuta, N. , Yoshihashi, K. , Kitazawa, T. , Suzuki, T. , Koga, T. , Hattori, K. , Shiraishi, T. , Haramura, M. , Kodama, H. , Ono, Y. , Esaki, T. , Sato, H. , Watanabe, Y. , Itoh, S. , Ohta, M. , Kozono, T.
(2005) Biochem Biophys Res Commun 327 : 589-596
Released 2005-12-08 Method X-RAY DIFFRACTION 2.4 Å
Organisms Macromolecule Unique Ligands BGC , CA , FUC , P5B
Kadono, S. , Sakamoto, A. , Kikuchi, Y. , Oh-eda, M. , Yabuta, N. , Yoshihashi, K. , Kitazawa, T. , Suzuki, T. , Koga, T. , Hattori, K. , Shiraishi, T. , Haramura, M. , Kodama, H. , Ono, Y. , Esaki, T. , Sato, H. , Watanabe, Y. , Itoh, S. , Ohta, M. , Kozono, T.
(2005) Biochem Biophys Res Commun 327 : 589-596
Released 2005-12-11 Method X-RAY DIFFRACTION 2.7 Å
Organisms Macromolecule Unique Ligands 5PI , BGC , CA , FUC
Miyazaki, Y. , Matsunaga, S. , Tang, J. , Maeda, Y. , Nakano, M. , Philippe, R.J. , Shibahara, M. , Liu, W. , Sato, H. , Wang, L. , Nolte, R.T.
(2005) Bioorg Med Chem Lett 15 : 2203-2207
Released 2005-08-23 Method X-RAY DIFFRACTION 1.71 Å
Organisms Macromolecule Unique Ligands LIF
Hayashi, T. , Murata, D. , Makino, M. , Sugimoto, H. , Matsuo, T. , Sato, H. , Shiro, Y. , Hisaeda, Y. , RIKEN Structural Genomics/Proteomics Initiative (RSGI)
(2006) Inorg Chem 45 : 10530-10536
Released 2006-10-31 Method X-RAY DIFFRACTION 2.26 Å
Organisms Macromolecule Unique Ligands HME , IMD
Dairaku, T. , Furuita, K. , Sato, H. , Sebera, J. , Nakashima, K. , Kondo, J. , Yamanaka, D. , Kondo, Y. , Okamoto, I. , Ono, A. , Sychrovsky, V. , Kojima, C. , Tanaka, Y.
(2016) Chemistry 22 : 13028-13031
Released 2016-08-31 Method SOLUTION NMR
Organisms Macromolecule Unique Ligands AG
Kadono, S. , Sakamoto, A. , Kikuchi, Y. , Oh-Eda, M. , Yabuta, N. , Koga, T. , Hattori, K. , Shiraishi, T. , Haramura, M. , Sato, H. , Ohta, M. , Kozono, T.
To be published
Released 2009-01-20 Method X-RAY DIFFRACTION 2.2 Å
Organisms Macromolecule Unique Ligands 567 , BGC , CA , FUC
Kadono, S. , Sakamoto, A. , Kikuchi, Y. , Oh-Eda, M. , Yabuta, N. , Koga, T. , Hattori, K. , Shiraishi, T. , Haramura, M. , Sato, H. , Ohta, M. , Kozono, T.
(2010) Chem Pharm Bull (Tokyo) 58 : 38-44
Released 2009-03-24 Method X-RAY DIFFRACTION 2.5 Å
Organisms Macromolecule Unique Ligands 359 , BGC , CA , FUC
Sugishima, M. , Sato, H. , Higashimoto, Y. , Harada, J. , Wada, K. , Fukuyama, K. , Noguchi, M.
(2014) Proc Natl Acad Sci U S A 111 : 2524-2529
Released 2014-01-29 Method X-RAY DIFFRACTION 4.3 Å
Organisms Macromolecule Unique Ligands FAD , FMN , HEM , NAP
Miyatake, H. , Sanjoh, A. , Matusda, G. , Murakami, T. , Murakami, H. , Hagiwara, K. , Yokoyama, M. , Sato, H. , Miyamoto, Y. , Dohmae, N. , Aida, Y.
(2016) J Mol Biol 428 : 2744-2757
Released 2016-06-01 Method X-RAY DIFFRACTION 2.3 Å
Organisms Macromolecule
Sato, H. , Sugishima, M. , Wada, K. , Hirabayashi, K. , Tsukaguchi, M.
(2021) Biochem J 478 : 1023-1042
Released 2021-03-17 Method X-RAY DIFFRACTION 2.4 Å
Organisms Macromolecule Unique Ligands DPM , FWL
Sato, H. , Sugishima, M. , Wada, K. , Hirabayashi, K. , Tsukaguchi, M.
(2021) Biochem J 478 : 1023-1042
Released 2021-03-17 Method X-RAY DIFFRACTION 2.31 Å
Organisms Macromolecule Unique Ligands 7J8 , FWL