RCSB PDB: Search

4NJE	Download File View File

Crystal structure of Pyrococcus furiosus L-asparaginase with ligand

Sharma, P., Tomar, R., Singh, S., Yadav, S.P.S., Ashish, Kundu, B.

(2014) Acta Crystallogr D Biol Crystallogr 70: 3187-3197

Released	2014-12-10
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	L-asparaginase (protein)
Unique Ligands	ASP

4Q0M	Download File View File

Crystal structure of Pyrococcus furiosus L-asparaginase

Sharma, P., Tomar, R., Singh, S., Yadav, S.P.S., Ashish, Kundu, B.

(2014) Acta Crystallogr D Biol Crystallogr 70: 3187-3197

Released	2014-12-10
Method	X-RAY DIFFRACTION 2.226 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	L-asparaginase (protein)
Unique Ligands	4CS, GOL, PO4

4RA6	Download File View File

Crystal structure of linker less Pyrococcus furiosus L-asparaginase

Sharma, P., Tomar, R., Ashish, Kundu, B.

(2014) Acta Crystallogr D Biol Crystallogr 70: 3187-3197

Released	2014-12-10
Method	X-RAY DIFFRACTION 2.503 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	L-asparaginase (protein)
Unique Ligands	GOL

4RA9	Download File View File

Crystal Structure of Conjoint Pyrococcus Furiosus L-asparaginase with Citrate

Sharma, P., Tomar, R., Singh, S., Yadav, S.P.S., Ashish, Kundu, B.

(2014) Acta Crystallogr D Biol Crystallogr 70: 3187-3197

Released	2014-12-10
Method	X-RAY DIFFRACTION 2.049 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	L-asparaginase (protein)
Unique Ligands	FLC, GOL, IPA

5B5U	Download File View File

Crystal structure of truncated Pyrococcus furiosus L-asparaginase with peptide

Sharma, P., Tomar, R., Nath, S.K., Kundu, B., Ashish, F.

(2020) Sci Rep 10: 21702-21702

Released	2017-05-31
Method	X-RAY DIFFRACTION 2.61 Å
Organisms	Pyrococcus furiosus Pyrococcus furiosus DSM 3638
Macromolecule	L-asparaginase (protein) LEU-VAL-VAL-ASN (protein)
Unique Ligands	ASP, CL, GOL, IPA

5B74	Download File View File

Crystal structure of conjoined Pyrococcus furiosus L-asparaginase with peptide

Sharma, P., Tomar, R., Nath, S.K., Kundu, B., Ashish, F.

(2020) Sci Rep 10: 21702-21702

Released	2017-06-14
Method	X-RAY DIFFRACTION 2.039 Å
Organisms	Pyrococcus furiosus Pyrococcus furiosus DSM 3638
Macromolecule	L-asparaginase (protein) LEU-VAL-VAL-ASN (protein)
Unique Ligands	CL, FLC

5CBP	Download File View File

Crystal Structure of Conjoint Pyrococcus furiosus L-asparaginase at 37 degree C

Sharma, P., Yadav, S.P., Tomar, R., Kundu, B., Ashish, F.

(2020) Sci Rep 10: 21702-21702

Released	2016-07-06
Method	X-RAY DIFFRACTION 2.358 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	L-asparaginase (protein)
Unique Ligands	FLC, GOL, IPA

8FTJ	Download File View File

Crystal structure of human NEIL1 (P2G (242K) C(delta)100) glycosylase bound to DNA duplex containing urea

Tomar, R., Sharma, P., Harp, J.M., Egli, M., Stone, M.P.

(2023) Nucleic Acids Res 51: 3754-3769

Released	2023-04-26
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Endonuclease 8-like 1 (protein) DNA (5'-D(CPGPTPCPCPAPUDVGPTPCPTPAPCP)-3') (nucleic acid) DNA (5'-D(TPAPGPAPCPAPTPGPGPAPCPGPG)-3') (nucleic acid)
Unique Ligands	EDO, SO4

8UJT	Download File View File

Crystal structure of human polymerase eta with incoming dAMPnPP nucleotide opposite urea lesion

(2024) Biochemistry 63: 754-766

Released	2024-03-20
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPT)-3') (nucleic acid) DNA (5'-D(CPAPTP(XB9)PAPTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	DZ4, MG

8UJV	Download File View File

Crystal structure of human polymerase eta with incoming dCMPnPP nucleotide opposite urea lesion

(2024) Biochemistry 63: 754-766

Released	2024-03-20
Method	X-RAY DIFFRACTION 2.23 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPT)-3') (nucleic acid) DNA (5'-D(CPAPTP(UD8)PAPTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	0KX, GOL, MG

8UJX	Download File View File

Crystal structure of human polymerase eta with incoming dGMPnPP nucleotide opposite urea lesion

(2024) Biochemistry 63: 754-766

Released	2024-03-20
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPT)-3') (nucleic acid) DNA (5'-D(CPAPTP(UD8)PAPTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	MG, XG4

8UK4	Download File View File

Crystal structure of human polymerase eta with incoming dTMPnPP nucleotide opposite urea lesion

(2024) Biochemistry 63: 754-766

Released	2024-03-20
Method	X-RAY DIFFRACTION 3.02 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPT)-3') (nucleic acid) DNA (5'-D(CPAPTP(UD8)PAPTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	1FZ, MG

9CHW	Download File View File

Crystal structure of human polymerase eta with incoming dAMPnPP nucleotide opposite threofuranosyl thymidine in DNA template

(2024) Biochemistry 63: 2425-2439

Released	2024-09-18
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPT)-3') (nucleic acid) DNA (5'-D(CPAPTP(TFT)PAPTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	DZ4, GOL, MG

9CI9	Download File View File

Crystal structure of human polymerase eta with incoming dCMPnPP nucleotide across threofuranosyl thymidine in DNA template at extension stage

(2024) Biochemistry 63: 2425-2439

Released	2024-09-18
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPA)-3') (nucleic acid) DNA (5'-D(CPAPTPGP(TFT)PTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	0KX, GOL, MG

9CIH	Download File View File

Crystal structure of human polymerase eta with incoming dCMPnPP nucleotide across O4-methyl threofuranosyl thymidine in DNA template at extension stage

(2024) Biochemistry 63: 2425-2439

Released	2024-09-18
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPA)-3') (nucleic acid) DNA (5'-D(CPAPTPGP(A1A0L)PTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	0KX, GOL, MG

9CIQ	Download File View File

Crystal structure of human polymerase eta with incoming threofuranosyl thymine nucleoside triphosphate opposite template dA

Patra, A., Tomar, R., Stone, M.P., Egli, M.

(2024) Biochemistry 63: 2425-2439

Released	2024-09-18
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPT)-3') (nucleic acid) DNA (5'-D(CPAPTPAPAPTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	A1ANT, CA, PEG

9CJ9	Download File View File

Crystal structure of human polymerase eta with incoming dAMPnPP nucleotide opposite O4-methyl threofuranosyl thymidine in DNA template at insertion stage