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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Bina, D."

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Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

	Synechocystis sp. PCC 6803 substr. Kazusa (6)
	Gemmatimonas phototrophica (4)
	Synechocystis sp. PCC 6803 (4)

Taxonomy

Bacteria (14)

Experimental Method

ELECTRON MICROSCOPY (14)

Polymer Entity Type

Protein (14)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (7)
	2.5 - 3.0 (5)

Release Date

2020 - 2024 (14)

Enzyme Classification Name

Lyases (6)

Membrane Protein Annotation

OPM (4)

Symmetry Type

	Asymmetric (11)
	Cyclic (3)

AllSelected

1 to 14 of 14 Structures

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7O0U	Download File View File

Cryo-EM structure (model_1a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.4 A

Qian, P., Koblizek, M.

(2022) Sci Adv 8: eabk3139-eabk3139

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.35 Å
Organisms	Gemmatimonas phototrophica
Macromolecule	Unique protein chains: 9
Unique Ligands	0V9, BCL, BPH, CD4, CRT, FE, HEC, LMT, MQ8, NDG, PGW, UYH, V75, V7B, V7N
Unique branched monosaccharides	MAN, RAM

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7O0V	Download File View File

Cryo-EM structure (model_2a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.5 A

Qian, P., Koblizek, M.

(2022) Sci Adv 8: eabk3139-eabk3139

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.5 Å
Organisms	Gemmatimonas phototrophica
Macromolecule	Unique protein chains: 12
Unique Ligands	0V9, BCL, BPH, CD4, CRT, FE, HEC, LMT, MQ8, NDG, PGW, UYH, V75, V7B, V7N
Unique branched monosaccharides	MAN, RAM

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7O0W	Download File View File

Cryo-EM structure of the RC-dLH complex (model_1b) from Gemmatimonas phototrophica at 2.47 A

Qian, P., Koblizek, M.

(2022) Sci Adv 8: eabk3139-eabk3139

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.47 Å
Organisms	Gemmatimonas phototrophica
Macromolecule	Unique protein chains: 11
Unique Ligands	0V9, BCL, BPH, CD4, CRT, FE, HEC, LMT, MQ8, NDG, PGW, UYH, V75, V7B, V7N
Unique branched monosaccharides	MAN, RAM

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7O0X	Download File View File

Cryo-EM structure (model_2b) of the RC-dLH complex from Gemmatimonas phototrophica at 2.44 A

Qian, P., Koblizek, M.

(2022) Sci Adv 8: eabk3139-eabk3139

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.44 Å
Organisms	Gemmatimonas phototrophica
Macromolecule	Unique protein chains: 11
Unique Ligands	0V9, BCL, BPH, CD4, CRT, FE, HEC, LMT, MQ8, NDG, PGW, UYH, V75, V7B, V7N
Unique branched monosaccharides	MAN, RAM

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7SC7	Download File View File

Synechocystis PCC 6803 Phycobilisome core from up-down rod conformation

Sauer, P.V., Sutter, M., Dominguez-Martin, M.A., Kirst, H., Kerfeld, C.A.

(2022) Nature 609: 835-845

Released	2022-08-31
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Unique protein chains: 8
Unique Ligands	CYC

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7SC8	Download File View File

Synechocystis PCC 6803 Phycobilisome rod from PBS sample

Sauer, P.V., Sutter, M., Dominguez-Martin, M.A., Kirst, H., Kerfeld, C.A.

(2022) Nature 609: 835-845

Released	2022-08-31
Method	ELECTRON MICROSCOPY 2.1 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Unique protein chains: 6
Unique Ligands	CYC

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7SC9	Download File View File

Synechocystis PCC 6803 Phycobilisome core, complex with OCP

Sauer, P.V., Sutter, M., Dominguez-Martin, M.A., Kirst, H., Kerfeld, C.A.

(2022) Nature 609: 835-845

Released	2022-08-31
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Unique protein chains: 9
Unique Ligands	45D, CYC

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7SCA	Download File View File

Synechocystis PCC 6803 Phycobilisome rod from OCP-PBS complex sample

Sauer, P.V., Sutter, M., Dominguez-Martin, M.A., Kirst, H., Kerfeld, C.A.

(2022) Nature 609: 835-845

Released	2022-08-31
Method	ELECTRON MICROSCOPY 2.1 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Unique protein chains: 6
Unique Ligands	CYC

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7SCB	Download File View File

B-cylinder of Synechocystis PCC 6803 Phycobilisome, complex with OCP - local refinement

Sauer, P.V., Sutter, M., Dominguez-Martin, M.A., Kirst, H., Kerfeld, C.A.

(2022) Nature 609: 835-845

Released	2022-08-31
Method	ELECTRON MICROSCOPY 2.5 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Unique protein chains: 9
Unique Ligands	45D, CYC

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7SCC	Download File View File

T-cylinder of Synechocystis PCC 6803 Phycobilisome, complex with OCP - local refinement

Sauer, P.V., Sutter, M., Dominguez-Martin, M.A., Kirst, H., Kerfeld, C.A.

(2022) Nature 609: 835-845

Released	2022-08-31
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Unique protein chains: 6
Unique Ligands	45D, CYC

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8TO2	Download File View File

Bottom cylinder of high-resolution phycobilisome quenched by OCP (local refinement)

Sauer, P.V., Sutter, M., Cupellini, L.

(2024) Sci Adv 10: eadk7535-eadk7535

Released	2024-04-17
Method	ELECTRON MICROSCOPY 2 Å
Organisms	Synechocystis sp. PCC 6803
Macromolecule	Unique protein chains: 9
Unique Ligands	45D, CYC

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8TO5	Download File View File

Central rod disk in C1 symmetry of high-resolution phycobilisome quenched by OCP (local refinement)

Sauer, P.V., Sutter, M., Cupellini, L.

(2024) Sci Adv 10: eadk7535-eadk7535

Released	2024-04-17
Method	ELECTRON MICROSCOPY 1.87 Å
Organisms	Synechocystis sp. PCC 6803
Macromolecule	C-phycocyanin alpha subunit (protein) C-phycocyanin beta subunit (protein) Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod 1 (protein) Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod 2 (protein)
Unique Ligands	CYC

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8TPJ	Download File View File

Top cylinder bound to OCP from high-resolution phycobilisome quenched by OCP (local refinement)

Sauer, P.V., Sutter, M., Cupellini, L.

(2024) Sci Adv 10: eadk7535-eadk7535

Released	2024-04-17
Method	ELECTRON MICROSCOPY 2.1 Å
Organisms	Synechocystis sp. PCC 6803
Macromolecule	Unique protein chains: 6
Unique Ligands	45D, CYC

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8TRO	Download File View File

Rod from high-resolution phycobilisome quenched by OCP (local refinement)

Sauer, P.V., Sutter, M., Cupellini, L.

(2024) Sci Adv 10: eadk7535-eadk7535

Released	2024-04-17
Method	ELECTRON MICROSCOPY 1.9 Å
Organisms	Synechocystis sp. PCC 6803
Macromolecule	Unique protein chains: 6
Unique Ligands	CYC

1 to 14 of 14 Structures

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