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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Kim, S.E."

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Search Summary

This query matches 17 Structures.

Refinements

Structure Determination Methodology

experimental (17)

Scientific Name of Source Organism

	Eptatretus burgeri (8)
	Homo sapiens (8)
	Opisthorchis viverrini (4)
	Mus musculus (3)
	Human immunodeficiency virus type 1 (2)
	Acropora digitifera (1)
	Yersinia pestis (1)
	synthetic construct (1)

Taxonomy

	Eukaryota (16)
	Riboviria (RNA viruses and viroids) (2)
	Bacteria (1)
	other sequences (1)

Experimental Method

X-RAY DIFFRACTION (17)

Polymer Entity Type

Protein (17)

Refinement Resolution (Å)

	1.5 - 2.0 (12)
	2.0 - 2.5 (2)
	2.5 - 3.0 (3)

Release Date

	2005 - 2009 (9)
	2010 - 2014 (3)
	2015 - 2019 (5)

Enzyme Classification Name

	Isomerases (4)
	Hydrolases (1)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (12)
	Cyclic (4)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (5)
	Alpha and beta proteins (a+b) (3)
	Artifacts (1)

AllSelected

1 to 17 of 17 Structures

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2YDU	Download File View File

Crystal structure of YopH in complex with 3-(1,1-dioxido-3- oxoisothiazolidin-5-yl)benzaldeyde

Lountos, G.T., Kim, S.E., Bahta, M., Ulrich, R.G., Waugh, D.S., Burke, T.R.

(2011) Acta Crystallogr D Biol Crystallogr 67: 639

Released	2011-11-02
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Yersinia pestis
Macromolecule	OUTER PROTEIN H PHOSPHATASE (protein)
Unique Ligands	79W

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2Z62	Download File View File

Crystal structure of the TV3 hybrid of human TLR4 and hagfish VLRB.61

Lee, J.-O., Kim, H.M., Park, B.S.

(2007) Cell 130: 906-917

Released	2007-09-18
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Eptatretus burgeri Homo sapiens
Macromolecule	Toll-like receptor 4, Variable lymphocyte receptor B (protein)
Unique branched monosaccharides	BMA, FUL, NAG

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2Z63	Download File View File

Crystal structure of the TV8 hybrid of human TLR4 and hagfish VLRB.61

Kim, H.M., Park, B.S., Lee, J.-O.

(2007) Cell 130: 906-917

Released	2007-09-18
Method	X-RAY DIFFRACTION 2 Å
Organisms	Eptatretus burgeri Homo sapiens
Macromolecule	Toll-like receptor 4, Variable lymphocyte receptor B (protein)
Unique branched monosaccharides	FUL, NAG

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2Z64	Download File View File

Crystal structure of mouse TLR4 and mouse MD-2 complex

Lee, J.-O., Kim, H.M., Park, B.S.

(2007) Cell 130: 906-917

Released	2007-09-18
Method	X-RAY DIFFRACTION 2.84 Å
Organisms	Mus musculus
Macromolecule	Lymphocyte antigen 96 (protein) Toll-like receptor 4 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, FUL, NAG

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2Z65	Download File View File

Crystal structure of the human TLR4 TV3 hybrid-MD-2-Eritoran complex

Lee, J.-O., Kim, H.M., Park, B.S.

(2007) Cell 130: 906-917

Released	2007-09-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Eptatretus burgeri Homo sapiens
Macromolecule	Lymphocyte antigen 96 (protein) Toll-like receptor 4, Variable lymphocyte receptor B (protein)
Unique Ligands	E55, NAG
Unique branched monosaccharides	BMA, NAG

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2Z66	Download File View File

Crystal structure of the VT3 hybrid of human TLR4 and hagfish VLRB.61

Lee, J.-O., Kim, H.M., Park, B.S.

(2007) Cell 130: 906-917

Released	2007-09-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Eptatretus burgeri Homo sapiens
Macromolecule	Variable lymphocyte receptor B, Toll-like receptor 4 (protein)
Unique Ligands	SO4
Unique branched monosaccharides	BMA, FUL, NAG

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2Z7X	Download File View File

Crystal structure of the TLR1-TLR2 heterodimer induced by binding of a tri-acylated lipopeptide

Lee, J.O., Jin, M.S., Kim, S.E., Heo, J.Y.

(2007) Cell 130: 1071-1082

Released	2007-10-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Eptatretus burgeri Homo sapiens synthetic construct
Macromolecule	Pam3CSK4 (protein) Toll-like receptor 1,Variable lymphocyte receptor B (protein) Toll-like receptor 2,Variable lymphocyte receptor B (protein)
Unique Ligands	NAG, PLM, Z41
Unique branched monosaccharides	BMA, MAN, NAG, NDG

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2Z80	Download File View File

Crystal structure of the TLR1-TLR2 heterodimer induced by binding of a tri-acylated lipopeptide

Lee, J.O., Jin, M.S., Kim, S.E., Heo, J.Y.

(2007) Cell 130: 1071-1082

Released	2007-09-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Eptatretus burgeri Homo sapiens
Macromolecule	Toll-like receptor 2, Variable lymphocyte receptor B (protein)
Unique Ligands	NAG

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2Z81	Download File View File

Crystal structure of the TLR1-TLR2 heterodimer induced by binding of a tri-acylated lipopeptide

Lee, J.O., Jin, M.S., Kim, S.E., Heo, J.Y.

(2007) Cell 130: 1071-1082

Released	2007-10-02
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Eptatretus burgeri Mus musculus
Macromolecule	Toll-like receptor 2, Variable lymphocyte receptor B (protein)
Unique Ligands	NAG, PCJ
Unique branched monosaccharides	BMA, MAN, NAG

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2Z82	Download File View File

Crystal structure of the TLR1-TLR2 heterodimer induced by binding of a tri-acylated lipopeptide

Lee, J.O., Jin, M.S., Kim, S.E., Heo, J.Y.

(2007) Cell 130: 1071-1082

Released	2007-10-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Eptatretus burgeri Mus musculus
Macromolecule	Toll-like receptor 2, Variable lymphocyte receptor B (protein)
Unique Ligands	NAG, PDJ
Unique branched monosaccharides	MAN, NAG

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3P9G	Download File View File

Crystal structure of the TSG101 UEV domain in complex with FA459 peptide

Hurley, J.H., Im, Y.J.

(2011) ACS Med Chem Lett 2: 337-341

Released	2011-06-29
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens Human immunodeficiency virus type 1
Macromolecule	Gag polyprotein (protein) Tumor susceptibility gene 101 protein (protein)

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3P9H	Download File View File

Crystal structure of the TSG101 UEV domain in complex with FA258 peptide

Hurley, J.H., Im, Y.J.

(2011) ACS Med Chem Lett 2: 337-341

Released	2011-06-29
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens Human immunodeficiency virus type 1
Macromolecule	Gag polyprotein (protein) Tumor susceptibility gene 101 protein (protein)

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5ZFX	Download File View File

Crystal Structure of Triosephosphate isomerase from Opisthorchis viverrini

Son, J., Kim, S., Kim, S.E., Lee, H., Lee, M.R., Hwang, K.Y.

(2018) Sci Rep 8: 15075-15075

Released	2018-10-24
Method	X-RAY DIFFRACTION 1.751 Å
Organisms	Opisthorchis viverrini
Macromolecule	Triosephosphate isomerase (protein)
Unique Ligands	MG

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5ZG4	Download File View File

Crystal Structure of Triosephosphate isomerase SAD deletion mutant from Opisthorchis viverrini

Son, J., Kim, S., Kim, S.E., Lee, H., Lee, M.R., Hwang, K.Y.

(2018) Sci Rep 8: 15075-15075

Released	2018-10-24
Method	X-RAY DIFFRACTION 1.746 Å
Organisms	Opisthorchis viverrini
Macromolecule	Triosephosphate isomerase (protein)

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5ZG5	Download File View File

Crystal Structure of Triosephosphate isomerase SADsubAAA mutant from Opisthorchis viverrini

Son, J., Kim, S., Kim, S.E., Lee, H., Lee, M.R., Hwang, K.Y.

(2018) Sci Rep 8: 15075-15075

Released	2018-10-24
Method	X-RAY DIFFRACTION 1.597 Å
Organisms	Opisthorchis viverrini
Macromolecule	Triosephosphate isomerase (protein)

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5ZGA	Download File View File

Crystal Structure of Triosephosphate isomerase SAD deletion and N115A mutant from Opisthorchis viverrini

Son, J., Kim, S., Kim, S.E., Lee, H., Lee, M.R., Hwang, K.Y.

(2018) Sci Rep 8: 15075-15075

Released	2018-10-24
Method	X-RAY DIFFRACTION 1.793 Å
Organisms	Opisthorchis viverrini
Macromolecule	Triosephosphate isomerase (protein)

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6AA7	Download File View File

Fluorescent protein from Acropora digitifera

Kim, S.E., Hwang, K.Y., Nam, K.H.

(2019) Protein Sci 28: 375-381

Released	2018-08-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Acropora digitifera
Macromolecule	Fluorescent protein (protein)

1 to 17 of 17 Structures

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