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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 3 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (3)

Scientific Name of Source Organism

	Oryctolagus cuniculus (3)
	Saccharomyces cerevisiae (2)
	Zindervirus SP6 (2)
	Homo sapiens (1)

Taxonomy

	Eukaryota (3)
	Duplodnaviria (2)

Experimental Method

ELECTRON MICROSCOPY (3)

Polymer Entity Type

	Protein (3)
	RNA (3)

Refinement Resolution (Å)

	2.5 - 3.0 (1)
	3.5 - 4.0 (2)

Release Date

2015 - 2019 (3)

Enzyme Classification Name

Lyases (1)

Symmetry Type

Asymmetric (3)

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1 to 3 of 3 Polymer Entities

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Explore in 3D

6GZ3	Download File View File

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)

Flis, J., Holm, M., Rundlet, E.J., Loerke, J., Hilal, T., Dabrowski, M., Buerger, J., Mielke, T., Blanchard, S.C., Spahn, C.M.T., Budkevich, T.V.

(2018) Cell Rep 25: 2676-2688.e7

Released	2018-12-05
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Oryctolagus cuniculus Saccharomyces cerevisiae Zindervirus SP6
Macromolecule	Unique protein chains: 79 Unique nucleic acid chains: 7
Unique Ligands	GNP, MG, ZN

Explore in 3D

6GZ5	Download File View File

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)

Flis, J., Holm, M., Rundlet, E.J., Loerke, J., Hilal, T., Dabrowski, M., Buerger, J., Mielke, T., Blanchard, S.C., Spahn, C.M.T., Budkevich, T.V.

(2018) Cell Rep 25: 2676-2688.e7

Released	2018-12-05
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Oryctolagus cuniculus Saccharomyces cerevisiae Zindervirus SP6
Macromolecule	Unique protein chains: 79 Unique nucleic acid chains: 7
Unique Ligands	GNP, MG, ZN

Explore in 3D

6SGC	Download File View File

Rabbit 80S ribosome stalled on a poly(A) tail

Chandrasekaran, V., Juszkiewicz, S., Choi, J., Puglisi, J.D., Brown, A., Shao, S., Ramakrishnan, V., Hegde, R.S.

(2019) Nat Struct Mol Biol 26: 1132-1140

Released	2019-12-04
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Homo sapiens Oryctolagus cuniculus
Macromolecule	Unique protein chains: 79 Unique nucleic acid chains: 6
Unique Ligands	MG, SPD, ZN

1 to 3 of 3 Polymer Entities

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

6GZ3

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)

6GZ5

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)

6SGC

Rabbit 80S ribosome stalled on a poly(A) tail