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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Chemical ID(s) = GAP

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Search Summary

This query matches 4 Structures.

Refinements

Structure Determination Methodology

experimental (4)

Scientific Name of Source Organism

	Bradyrhizobium japonicum (1)
	Homo sapiens (1)
	Thermus thermophilus HB8 (1)
	Vibrio cholerae O1 biovar El Tor str. N16961 (1)

Taxonomy

	Bacteria (3)
	Eukaryota (1)

Experimental Method

X-RAY DIFFRACTION (4)

Polymer Entity Type

	Protein (4)
	RNA (1)

Refinement Resolution (Å)

	2.0 - 2.5 (2)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	1995 - 1999 (1)
	2010 - 2014 (2)
	2015 - 2019 (1)

Enzyme Classification Name

	Ligases (3)
	Transferases (1)

Symmetry Type

	Cyclic (3)
	Asymmetric (1)

SCOP Classification

	Alpha and beta proteins (a+b) (1)
	Alpha and beta proteins (a/b) (1)

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1 to 4 of 4 Structures

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1GGM	Download File View File

GLYCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH GLYCYL-ADENYLATE

Arnez, J.G., Moras, D.

(1999) J Mol Biol 286: 1449-1459

Released	1999-01-28
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Thermus thermophilus HB8
Macromolecule	Glycine--tRNA ligase (protein)
Unique Ligands	GAP

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3PZC	Download File View File

Crystal structure of class II aaRS homologue (Bll0957) complexed with Coenzyme A

Weygand-Durasevic, I., Luic, M., Mocibob, M., Ivic, N., Subasic, D.

(2011) Croat Chem Acta 84: 149-157

Released	2011-10-19
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bradyrhizobium japonicum
Macromolecule	Amino acid--[acyl-carrier-protein] ligase 1 (protein)
Unique Ligands	ACT, COA, GAP, GOL, ZN

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4OXI	Download File View File

Crystal structure of Vibrio cholerae adenylation domain AlmE in complex with glycyl-adenosine-5'-phosphate

Fage, C.D., Henderson, J.C., Keatinge-Clay, A.T., Trent, M.S.

(2014) ACS Chem Biol 9: 2382-2392

Released	2014-12-31
Method	X-RAY DIFFRACTION 2.261 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	Enterobactin synthetase component F-related protein (protein)
Unique Ligands	GAP

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5E6M	Download File View File

Crystal structure of human wild type GlyRS bound with tRNAGly

Xie, W., Qin, X., Deng, X., Chen, L., Liu, Y.

(2016) J Mol Biol 428: 3603-3614

Released	2016-07-20
Method	X-RAY DIFFRACTION 2.927 Å
Organisms	Homo sapiens
Macromolecule	Glycine--tRNA ligase (protein) tRNA(Gly) (nucleic acid)
Unique Ligands	GAP, NI, SO4

1 to 4 of 4 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

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Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

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