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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "avrPtoB"

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Pseudomonas syringae pv. tomato (2)
	Saccharomyces cerevisiae S288C (2)
	Arthrobacter globiformis (1)
	Bos taurus (1)
	Cricetulus griseus (1)
	Homo sapiens (1)
	Mus musculus (1)
	Mycobacterium tuberculosis (1)
	Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (1)
	Rattus norvegicus (1)

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Taxonomy

	Eukaryota (7)
	Bacteria (5)
	Riboviria (1)

Experimental Method

	X-RAY DIFFRACTION (7)
	ELECTRON MICROSCOPY (4)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (3)
	2.5 - 3.0 (2)
	3.0 - 3.5 (1)
	3.5 - 4.0 (3)
	4.0 - 4.5 (1)

Release Date

	2005 - 2009 (5)
	2010 - 2014 (2)
	2015 - 2019 (4)

Enzyme Classification Name

	Ligases (3)
	Hydrolases (2)
	Transferases (2)
	Oxidoreductases (1)

Symmetry Type

	Asymmetric (11)
	Cyclic (1)

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1 to 11 of 11 Structures

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2JBV	Download File View File

Crystal structure of choline oxidase reveals insights into the catalytic mechanism

Lountos, G.T., Fan, F., Gadda, G., Orville, A.M.

(2008) Biochemistry 47: 243

Released	2007-12-25
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Arthrobacter globiformis
Macromolecule	CHOLINE OXIDASE (protein)
Unique Ligands	DMS, FAO, UNX

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2ZMV	Download File View File

Crystal structure of Synbindin

Fan, F.

(2009) Biochem Biophys Res Commun 378: 338-343

Released	2008-07-01
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Trafficking protein particle complex subunit 4 (protein)

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3C8Z	Download File View File

The 1.6 A Crystal Structure of MshC: The Rate Limiting Enzyme in the Mycothiol Biosynthetic Pathway

Tremblay, L.W., Fan, F., Vetting, M.W., Blanchard, J.S.

(2008) Biochemistry 47: 13326-13335

Released	2008-12-30
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Macromolecule	Cysteinyl-tRNA synthetase (protein)
Unique Ligands	1PE, 5CA, EPE, SO4, ZN

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3HGK	Download File View File

crystal structure of effect protein AvrptoB complexed with kinase Pto

Dong, J., Fan, F., Gu, L., Chai, J.

(2009) Plant Cell 21: 1846-1859

Released	2009-06-23
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Pseudomonas syringae pv. tomato Solanum pimpinellifolium
Macromolecule	Effector protein hopAB2 (protein) Protein kinase (protein)

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3HGL	Download File View File

crystal of AvrPtoB 121-205

Dong, J., Xiao, F., Fan, F., Gu, L., Cang, H., Martin, G.B., Chai, J.

(2009) Plant Cell 21: 1846-1859

Released	2009-06-23
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pseudomonas syringae pv. tomato
Macromolecule	Effector protein hopAB2 (protein)

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3M6B	Download File View File

Crystal Structure of the Ertapenem Pre-isomerized Covalent Adduct with TB B-lactamase

Tremblay, L.W., Fan, F., Blanchard, J.S.

(2010) Biochemistry 49: 3766-3773

Released	2010-04-14
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Beta-lactamase (protein)
Unique Ligands	1RG, PO4

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3VE6	Download File View File

Crystal Structure Analysis of Venezuelan Equine Encephalitis Virus Capsid Protein NLS and Importin Alpha

Fan, F.

To be published

Released	2012-01-25
Method	X-RAY DIFFRACTION 2.829 Å
Organisms	Mus musculus Venezuelan equine encephalitis virus
Macromolecule	Importin subunit alpha-2 (protein) Venezuelan equine encephalitis virus capsid protein NLS (protein)

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5XMI	Download File View File

Cryo-EM Structure of the ATP-bound VPS4 mutant-E233Q hexamer (masked)

Sun, S., Li, L., Yang, F., Wang, X., Fan, F., Li, X., Wang, H., Sui, S.

(2017) Nat Commun 8: 16064-16064

Released	2017-08-09
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Vacuolar protein sorting-associated protein 4 (protein)
Unique Ligands	ATP

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5XMK	Download File View File

Cryo-EM structure of the ATP-bound Vps4 mutant-E233Q complex with Vta1 (masked)

Sun, S., Li, L., Yang, F., Wang, X., Fan, F., Li, X., Wang, H., Sui, S.

(2017) Nat Commun 8: 16064-16064

Released	2017-08-09
Method	ELECTRON MICROSCOPY 4.18 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Vacuolar protein sorting-associated protein 4 (protein) Vacuolar protein sorting-associated protein VTA1 (protein)
Unique Ligands	ATP

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6IP1	Download File View File

alpha-SNAP-SNARE subcomplex in the whole 20S complex

Huang, X., Sun, S., Wang, X., Fan, F., Zhou, Q., Sui, S.F.

(2019) Sci Adv 5: eaau8164-eaau8164

Released	2019-04-24
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Bos taurus Rattus norvegicus
Macromolecule	Alpha-soluble NSF attachment protein (protein) Synaptosomal-associated protein 25 (protein) Syntaxin-1A (protein) Vesicle-associated membrane protein 2 (protein)

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6IP2	Download File View File

NSF-D1D2 part in the whole 20S complex

Huang, X., Sun, S., Wang, X., Fan, F., Zhou, Q., Sui, S.F.

(2019) Sci Adv 5: eaau8164-eaau8164

Released	2019-04-24
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Cricetulus griseus
Macromolecule	Vesicle-fusing ATPase (protein)
Unique Ligands	ATP

1 to 11 of 11 Structures

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