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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Streptomyces alboniger"

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This query matches 3 Structures.

Refinements

Structure Determination Methodology

experimental (3)

Scientific Name of Source Organism

	Escherichia coli (3)
	Thermus thermophilus HB8 (3)
	Streptomyces alboniger (2)

Taxonomy

Bacteria (3)

Experimental Method

X-RAY DIFFRACTION (3)

Polymer Entity Type

	Protein (3)
	RNA (3)

Refinement Resolution (Å)

	3.0 - 3.5 (2)
	3.5 - 4.0 (1)

Release Date

2015 - 2019 (3)

Enzyme Classification Name

Hydrolases (3)

Symmetry Type

Asymmetric (3)

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6NY6	Download File View File

Structure of dimeric Escherichia coli toxin YoeB bound to the Thermus thermophilus 30S ribosome

Pavelich, I.J., Hoffer, E.D., Maehigashi, T., Dunham, C.M.

(2019) Nucleic Acids Res 47: 10400-10413

Released	2019-08-21
Method	X-RAY DIFFRACTION 3.74 Å
Organisms	Escherichia coli Thermus thermophilus HB8
Macromolecule	Unique protein chains: 21 Unique nucleic acid chains: 1
Unique Ligands	MG, SF4, ZN

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6OXA	Download File View File

Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)

Pavelich, I.J., Hoffer, E.D., Maehigashi, T., Dunham, C.M.

(2019) Nucleic Acids Res 47: 10400-10413

Released	2019-08-21
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Escherichia coli Streptomyces alboniger Thermus thermophilus HB8
Macromolecule	Unique protein chains: 50 Unique nucleic acid chains: 6
Unique Ligands	MG, SF4, ZN

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6OXI	Download File View File

Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)

Pavelich, I.J., Hoffer, E.D., Maehigashi, T., Dunham, C.M.

(2019) Nucleic Acids Res 47: 10400-10413

Released	2019-08-21
Method	X-RAY DIFFRACTION 3.495 Å
Organisms	Escherichia coli Streptomyces alboniger Thermus thermophilus HB8
Macromolecule	Unique protein chains: 50 Unique nucleic acid chains: 6
Unique Ligands	MG, SF4, ZN

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

6NY6

Structure of dimeric Escherichia coli toxin YoeB bound to the Thermus thermophilus 30S ribosome

6OXA

Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)

6OXI

Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)