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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Enzyme Classification Number = 2.8.1.11

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Search Summary

This query matches 3 Structures.

Refinements

Structure Determination Methodology

experimental (3)

Scientific Name of Source Organism

	Homo sapiens (3)
	Orthonairovirus haemorrhagiae (2)
	Drosophila melanogaster (1)

Taxonomy

	Eukaryota (3)
	Riboviria (2)

Experimental Method

	X-RAY DIFFRACTION (2)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (3)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (1)

Release Date

	2010 - 2014 (2)
	2020 - 2024 (1)

Enzyme Classification Name

	Transferases (3)
	Hydrolases (2)

Symmetry Type

Asymmetric (3)

SCOP Classification

Alpha and beta proteins (a+b) (2)

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3PRM	Download File View File

Structural analysis of a viral OTU domain protease from the Crimean-Congo Hemorrhagic Fever virus in complex with human ubiquitin

Capodagli, G.C., McKercher, M.A., Baker, E.A., Masters, E.M., Brunzelle, J.S., Pegan, S.D.

(2011) J Virol 85: 3621-3630

Released	2011-01-26
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens Orthonairovirus haemorrhagiae
Macromolecule	Polyubiquitin-B (Fragment) (protein) RNA-directed RNA polymerase L (protein)

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3PRP	Download File View File

Structural analysis of a viral OTU domain protease from the Crimean-Congo Hemorrhagic Fever virus in complex with human ubiquitin

Capodagli, G.C., McKercher, M.A., Baker, E.A., Masters, E.M., Brunzelle, J.S., Pegan, S.D.

(2011) J Virol 85: 3621-3630

Released	2011-01-26
Method	X-RAY DIFFRACTION 1.699 Å
Organisms	Homo sapiens Orthonairovirus haemorrhagiae
Macromolecule	Polyubiquitin-B (Fragment) (protein) RNA-directed RNA polymerase L (protein)

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9C5E	Download File View File

Covalent Complex Between Parkin Catalytic (Rcat) Domain and Ubiquitin

Connelly, E.M., Rintala-Dempsey, A.C., Gundogdu, M., Freeman, E.A., Koszela, J., Aguirre, J.D., Zhu, G., Kamarainen, O., Tadayon, R., Walden, H., Shaw, G.S.

(2024) Proc Natl Acad Sci U S A 121: e2403114121-e2403114121

Released	2024-08-14
Method	SOLUTION NMR
Organisms	Drosophila melanogaster Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase parkin (protein) Polyubiquitin-B (protein)
Unique Ligands	ZN

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3PRM

Structural analysis of a viral OTU domain protease from the Crimean-Congo Hemorrhagic Fever virus in complex with human ubiquitin

3PRP

Structural analysis of a viral OTU domain protease from the Crimean-Congo Hemorrhagic Fever virus in complex with human ubiquitin

9C5E

Covalent Complex Between Parkin Catalytic (Rcat) Domain and Ubiquitin