RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: PubMed ID = 23061670

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Homo sapiens (5)
	Methanocaldococcus jannaschii (2)
	Methanocaldococcus jannaschii DSM 2661 (2)
	Molluscum contagiosum virus subtype 1 (2)
	Cereibacter sphaeroides (1)
	Escherichia coli (1)

Taxonomy

	Eukaryota (5)
	Archaea (2)
	Bacteria (2)
	Varidnaviria (2)

Experimental Method

	ELECTRON MICROSCOPY (6)
	X-RAY DIFFRACTION (4)

Polymer Entity Type

	Protein (10)
	RNA (5)
	DNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	2.5 - 3.0 (2)
	3.0 - 3.5 (2)
	3.5 - 4.0 (3)
	4.0 - 4.5 (1)
	> 4.5 (1)

Release Date

	2005 - 2009 (2)
	2015 - 2019 (3)
	2020 - 2024 (5)

Enzyme Classification Name

	Hydrolases (2)
	Transferases (3)
	Isomerases (1)

Membrane Protein Annotation

	MemProtMD (1)
	PDBTM (1)

Symmetry Type

	Asymmetric (8)
	Cyclic (2)

SCOP Classification

	All alpha proteins (1)
	All beta proteins (1)
	Alpha and beta proteins (a+b) (1)
	Small proteins (1)

AllSelected

1 to 10 of 10 Structures

Page 1 of 1

Sort by

Explore in 3D

2BBR	Download File View File

Crystal Structure of MC159 Reveals Molecular Mechanism of DISC Assembly and vFLIP Inhibition

Yang, J.K., Wang, L., Zheng, L., Wan, F., Ahmed, M., Lenardo, M.J., Wu, H.

(2005) Mol Cell 20: 939-949

Released	2006-02-14
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Molluscum contagiosum virus subtype 1
Macromolecule	Viral CASP8 and FADD-like apoptosis regulator (protein)
Unique Ligands	AZI

Explore in 3D

2BBZ	Download File View File

Crystal Structure of MC159 Reveals Molecular Mechanism of DISC Assembly and vFLIP Inhibition

Yang, J.K., Wang, L., Zheng, L., Wan, F., Ahmed, M., Lenardo, M.J., Wu, H.

(2005) Mol Cell 20: 939-949

Released	2006-02-14
Method	X-RAY DIFFRACTION 3.8 Å
Organisms	Molluscum contagiosum virus subtype 1
Macromolecule	Viral CASP8 and FADD-like apoptosis regulator (protein)

Explore in 3D

5V33	Download File View File

R. sphaeroides photosythetic reaction center mutant - Residue L223, Ser to Trp - Room Temperature Structure Solved on X-ray Transparent Microfluidic Chip

Schieferstein, J.M., Pawate, A.S., Sun, C., Wan, F., Broecker, J., Ernst, O.P., Gennis, R.B., Kenis, P.J.A.

(2017) Biomicrofluidics 11: 024118-024118

Released	2017-04-12
Method	X-RAY DIFFRACTION 3.487 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Reaction center protein H chain (protein) Reaction center protein L chain (protein) Reaction center protein M chain (protein)
Unique Ligands	BCL, BPH, FE, U10

Explore in 3D

6K0A	Download File View File

cryo-EM structure of an archaeal Ribonuclease P

Wan, F., Lan, P., Wu, J., Lei, M.

(2019) Nat Commun 10: 2617-2617

Released	2019-06-19
Method	ELECTRON MICROSCOPY 4.6 Å
Organisms	Methanocaldococcus jannaschii Methanocaldococcus jannaschii DSM 2661
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 1
Unique Ligands	ZN

Explore in 3D

6K0B	Download File View File

cryo-EM structure of archaeal Ribonuclease P with mature tRNA

Wan, F., Lan, P., Wu, J., Lei, M.

(2019) Nat Commun 10: 2617-2617

Released	2019-06-19
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Escherichia coli Methanocaldococcus jannaschii Methanocaldococcus jannaschii DSM 2661
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 2
Unique Ligands	ZN

Explore in 3D

7D58	Download File View File

cryo-EM structure of human RNA polymerase III in elongating state

Wang, Q., Wan, F., Lan, P., Wu, J., Lei, M.

(2021) Nat Struct Mol Biol 28: 220-227

Released	2021-02-17
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Homo sapiens
Macromolecule	Unique protein chains: 17 Unique nucleic acid chains: 3
Unique Ligands	SF4, ZN

Explore in 3D

7D59	Download File View File

cryo-EM structure of human RNA polymerase III in apo state

Wang, Q., Wan, F., Lan, P., Wu, J., Lei, M.

(2021) Nat Struct Mol Biol 28: 220-227

Released	2021-02-17
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Homo sapiens
Macromolecule	Unique protein chains: 17
Unique Ligands	SF4, ZN

Explore in 3D

7V99	Download File View File

catalytic core of human telomerase holoenzyme

Wan, F., Ding, Y., Yang, L., Wu, Z., Wu, J., Lei, M.

(2021) Cell Res 31: 1275-1290

Released	2022-03-30
Method	ELECTRON MICROSCOPY 3.54 Å
Organisms	Homo sapiens
Macromolecule	Histone H2A type 1-B/E (protein) Histone H2B type 1-K (protein) Telomerase reverse transcriptase (protein) Primer DNA (nucleic acid) Telomerase RNA component (nucleic acid)

Explore in 3D

7V9A	Download File View File

biogenesis module of human telomerase holoenzyme

Wan, F., Ding, Y., Yang, L., Wu, Z., Wu, J., Lei, M.

(2021) Cell Res 31: 1275-1290

Released	2022-03-30
Method	ELECTRON MICROSCOPY 3.94 Å
Organisms	Homo sapiens
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 1

Explore in 3D

7X9G	Download File View File

Crystal structure of human EDA and EDAR

Yu, K., Wan, F., Huang, C., Wu, J., Lei, M.

(2023) Nat Commun 14: 767-767

Released	2023-02-22
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Ectodysplasin-A, secreted form (protein) Tumor necrosis factor receptor superfamily member EDAR (protein)

1 to 10 of 10 Structures

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

All questions and comments will receive a response in a timely manner.

Use this form for questions about RCSB.org and RCSB PDB services.
Please attach a screenshot when reporting an issue, if possible.
To update/release your in-progress structure depositions:
access the OneDep Communication panel
For questions/corrections to specific PDB entries, including citation updates:
email deposit-help@mail.wwpdb.org

First Name

Last Name

Subject

Question, Comment, Feedback or Other

Attach File(s)
Use CTRL or Shift keys to select more than one file ( files max)

I agree to the Help Desk Privacy Policy

Optional: To help us learn more about our users, what is your:

Institution Type

Role

Main Research Interest

Thank you for providing your feedback! Someone will be in touch with you shortly. This window will automatically close in 5 seconds.

Apologies, our feedback server is currently unavailable and we are troubleshooting the issue. In the meantime, please copy and paste the below information into an email addressed to info@rcsb.org

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification