2DYF

Solution structure of the first WW domain of FBP11 / HYPA (FBP11 WW1) complexed with a PL (PPLP) motif peptide ligand

• PDB DOI: https://doi.org/10.2210/pdb2DYF/pdb
• BMRB: 6721

• Classification: PROTEIN BINDING
• Organism(s): Homo sapiens, Saccharomyces cerevisiae
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2006-09-11 Released: 2006-10-24 
• Deposition Author(s): Kato, Y., Miyakawa, T., Kurita, J., Tanokura, M.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Literature

Complex structure of fbp11 ww1 and a pl ligand reveals the mechanism of proline-rich ligand recognition by group-II/III ww domains

Kato, Y., Miyakawa, T., Kurita, J., Tanokura, M.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 2-mer - A1B1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 4.51 kDa 
• Atom Count: 317 
• Modelled Residue Count: 39 
• Deposited Residue Count: 39 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Huntingtin-interacting protein HYPA/FBP11	A	30	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for O75400 (Homo sapiens) Explore O75400  Go to UniProtKB:  O75400
PHAROS:  O75400 GTEx:  ENSG00000196504

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
PL (PPLP) motif peptide from Myosin tail region-interacting protein MTI1	B	9	Saccharomyces cerevisiae	Mutation(s): 0
UniProt
Find proteins for P47068 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P47068  Go to UniProtKB:  P47068

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2006-10-24 
Deposition Author(s): Kato, Y., Miyakawa, T., Kurita, J., Tanokura, M.

Revision History  

• Version 1.0: 2006-10-24
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-03-09
  Changes: Data collection, Database references, Derived calculations, Experimental preparation
• Version 1.4: 2024-05-29
  Changes: Data collection