2LV9

Solution NMR structure of the PHD domain of human MLL5, Northeast structural genomics consortium target HR6512A

• PDB DOI: https://doi.org/10.2210/pdb2LV9/pdb
• BMRB: 18559

• Classification: TRANSFERASE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2012-06-29 Released: 2012-09-05 
• Deposition Author(s): Lemak, A., Yee, A., Houliston, S., Garcia, M., Wu, H., Min, J., Montelione, G.T., Arrowsmith, C., Northeast Structural Genomics Consortium (NESG), Structural Genomics Consortium (SGC), Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

NMR solution structure of the human MLL5 PHD domain (CASP Target)

Lemak, A., Yee, A., Houliston, S., Garcia, M., Wu, H., Min, J., Montelione, G.T., Arrowsmith, C.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 11.65 kDa 
• Atom Count: 645 
• Modelled Residue Count: 80 
• Deposited Residue Count: 98 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Histone-lysine N-methyltransferase MLL5	A	98	Homo sapiens	Mutation(s): 0  Gene Names: MLL5, KMT2E EC: 2.1.1.43
UniProt & NIH Common Fund Data Resources
Find proteins for Q8IZD2 (Homo sapiens) Explore Q8IZD2  Go to UniProtKB:  Q8IZD2
PHAROS:  Q8IZD2 GTEx:  ENSG00000005483

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A], C [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2012-09-05 
Deposition Author(s): Lemak, A., Yee, A., Houliston, S., Garcia, M., Wu, H., Min, J., Montelione, G.T., Arrowsmith, C., Northeast Structural Genomics Consortium (NESG), Structural Genomics Consortium (SGC), Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)

Revision History  

• Version 1.0: 2012-09-05
  Type: Initial release
  
• Version 1.1: 2012-11-28
  Changes: Structure summary
• Version 1.2: 2024-05-01
  Changes: Data collection, Database references, Derived calculations