Crystal Structure of a putative dihydrodipicolinate synthetase from Pseudomonas aeruginosa
Qiu, W., Lam, R., Romanov, V., Jones, K., Pai, E.F., Chirgadze, N.Y.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
putative dihydrodipicolinate synthetase | 315 | Pseudomonas aeruginosa | Mutation(s): 0 Gene Names: PA0223 EC: 4.2.1.52 | ![]() | |
UniProt | |||||
Find proteins for Q9I6R5 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9I6R5 Go to UniProtKB: Q9I6R5 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9I6R5 | ||||
Sequence AnnotationsExpand | |||||
LOADING 89% |
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MLT Query on MLT | F [auth A], I [auth C], K [auth D] | D-MALATE C4 H6 O5 BJEPYKJPYRNKOW-UWTATZPHSA-N | |||
MG Query on MG | E [auth A], G [auth B], H [auth C], J [auth D] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Modified Residues 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
CSO Query on CSO | A, B, C, D | L-PEPTIDE LINKING | C3 H7 N O3 S | CYS | |
MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 107.37 | α = 90 |
b = 156.21 | β = 90 |
c = 76.58 | γ = 90 |
Software Name | Purpose |
---|---|
ADSC | data collection |
SHARP | phasing |
REFMAC | refinement |
XDS | data reduction |
XDS | data scaling |