5O51

AfRom2 CNH domain

PDB DOI: https://doi.org/10.2210/pdb5O51/pdb

Classification: PROTEIN BINDING
Organism(s): Aspergillus fumigatus Af293
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2017-05-31 Released: 2018-06-13
Deposition Author(s): Wei, W., van Aalten, D.
Funding Organization(s): Medical Research Council (United Kingdom)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.01 Å
R-Value Free:
0.248 (Depositor), 0.250 (DCC)
R-Value Work:
0.205 (Depositor), 0.210 (DCC)
R-Value Observed:
0.207 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Rom2 CNH domain from Aspergillus fumigatus is an atypical seven-bladed WD-40 protein

Wei, W., van Aalten, D.

To be published.

Macromolecule Content

Total Structure Weight: 38.36 kDa
Atom Count: 2,539
Modelled Residue Count: 309
Deposited Residue Count: 338
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Rho guanyl nucleotide exchange factor (Rom2), putative	A	338	Aspergillus fumigatus Af293	Mutation(s): 0 Gene Names: AFUA_5G08550
UniProt
Find proteins for Q4WUI2 (Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)) Explore Q4WUI2 Go to UniProtKB: Q4WUI2
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q4WUI2
Sequence Annotations Expand
Reference Sequence LOADING

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.01 Å
R-Value Free: 0.248 (Depositor), 0.250 (DCC)
R-Value Work: 0.205 (Depositor), 0.210 (DCC)
R-Value Observed: 0.207 (Depositor)

Diffraction Data: https://doi.org/10.15785/SBGRID/505

Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 77.98	α = 90
b = 93.71	β = 90
c = 52.6	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
xia2	data reduction
xia2	data scaling
MOLREP	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2018-06-13

Deposition Author(s):

Funding Organization	Location	Grant Number
Medical Research Council (United Kingdom)	United Kingdom	--

Revision History (Full details and data files)

Version 1.0: 2018-06-13
Type: Initial release
Version 1.1: 2019-10-16
Changes: Data collection
Version 1.2: 2024-05-08
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.