Crystal Structure of the [Co2+-(Chromomycin A3)2]-CCG repeats Complex
Tseng, W.H., Wu, P.C., Satange, R.B., Hou, M.H.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 1 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*TP*TP*CP*GP*CP*CP*GP*CP*CP*GP*AP*A)-3') | 13 | synthetic construct | ![]() | ||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CPH Query on CPH | G [auth A], J [auth B] | (1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose C21 H24 O9 AOCJXLJIUYHXRS-PKRZCTMMSA-N | |||
CO Query on CO | H [auth A], I [auth A], K [auth B] | COBALT (II) ION Co XLJKHNWPARRRJB-UHFFFAOYSA-N |
Entity ID: 2 | |||||
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ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_001136 Query on PRD_001136 | C, F | Chromomycin A3, Monomer | Oligosaccharide / Antibiotic |
Entity ID: 3 | |||||
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ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_001136 Query on PRD_001136 | D, E | Chromomycin A3, Monomer | Oligosaccharide / Antibiotic |
Length ( Å ) | Angle ( ˚ ) |
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a = 48.309 | α = 90 |
b = 48.309 | β = 90 |
c = 83.636 | γ = 120 |
Software Name | Purpose |
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Blu-Ice | data collection |
HKL-2000 | data processing |
SCALEPACK | data scaling |
PHENIX | model building |
PHENIX | refinement |