RCSB PDB - 8YL7: EDS1-SAG101-NRG1C heterotrimer

 8YL7

EDS1-SAG101-NRG1C heterotrimer


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Activation and inhibition mechanisms of a plant helper NLR

Xiao, Y.Wu, X.Wang, Z.Wan, L.

(2025) Nature 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Protein EDS1623Arabidopsis thalianaMutation(s): 0 
Gene Names: EDS1EDS1-90EDS1AAt3g48090T17F15.40
UniProt
Find proteins for Q9SU72 (Arabidopsis thaliana)
Explore Q9SU72 
Go to UniProtKB:  Q9SU72
Entity Groups  
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UniProt GroupQ9SU72
Sequence Annotations
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Senescence-associated carboxylesterase 101537Arabidopsis thalianaMutation(s): 0 
Gene Names: SAG101At5g14930F2G14.50
EC: 3.1.1.1
UniProt
Find proteins for Q4F883 (Arabidopsis thaliana)
Explore Q4F883 
Go to UniProtKB:  Q4F883
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UniProt GroupQ4F883
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Probable disease resistance protein At5g66890415Arabidopsis thalianaMutation(s): 0 
Gene Names: At5g66890MUD21.15
UniProt
Find proteins for Q9FKZ2 (Arabidopsis thaliana)
Explore Q9FKZ2 
Go to UniProtKB:  Q9FKZ2
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UniProt GroupQ9FKZ2
Sequence Annotations
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
A1L15 (Subject of Investigation/LOI)
Query on A1L15

Download Ideal Coordinates CCD File 
D [auth A][[(2~{R},3~{R},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-[(2~{S},3~{R},4~{S},5~{R})-5-[[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-3,4-bis(oxidanyl)oxolan-2-yl]oxy-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
C25 H37 N10 O26 P5
BLHBPWIRUPJXKW-VIUUMBSUSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China32270304
Chinese Academy of SciencesChinaXDB27040214

Revision History  (Full details and data files)

  • Version 1.0: 2025-01-29
    Type: Initial release