1BUY

HUMAN ERYTHROPOIETIN, NMR MINIMIZED AVERAGE STRUCTURE

• PDB DOI: https://doi.org/10.2210/pdb1BUY/pdb

• Classification: CYTOKINE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 1998-09-08 Released: 1999-09-10 
• Deposition Author(s): Cheetham, J.C., Smith, D.M., Aoki, K.H., Stevenson, J.L., Hoeffel, T.J., Syed, R.S., Egrie, J., Harvey, T.S.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Submitted: 1 
• Selection Criteria: LEAST RESTRAINT VIOLATION 

Literature

NMR structure of human erythropoietin and a comparison with its receptor bound conformation.

Cheetham, J.C., Smith, D.M., Aoki, K.H., Stevenson, J.L., Hoeffel, T.J., Syed, R.S., Egrie, J., Harvey, T.S.

(1998) Nat Struct Biol 5: 861-866

• PubMed: 9783743 
• DOI: https://doi.org/10.1038/2302
• Primary Citation of Related Structures:  
  1BUY


• PubMed Abstract: 
  

  The solution structure of human erythropoietin (EPO) has been determined by nuclear magnetic resonance spectroscopy and the overall topology of the protein is revealed as a novel combination of features taken from both the long-chain and short-chain families of hematopoietic growth factors. Using the structure and data from mutagenesis studies we have elucidated the key physiochemical properties defining each of the two receptor binding sites on the EPO protein. A comparison of the NMR structure of the free EPO ligand to the receptor bound form, determined by X-ray crystallography, reveals conformational changes that may accompany receptor binding.

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Organizational Affiliation: 

Amgen Inc, Thousand Oaks, California 91320, USA. [e-mail]

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 18.46 kDa 
• Atom Count: 1,297 
• Modelled Residue Count: 166 
• Deposited Residue Count: 166 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
PROTEIN (ERYTHROPOIETIN)	A	166	Homo sapiens	Mutation(s): 3
UniProt & NIH Common Fund Data Resources
Find proteins for P01588 (Homo sapiens) Explore P01588  Go to UniProtKB:  P01588
PHAROS:  P01588 GTEx:  ENSG00000130427

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Submitted: 1 
• Selection Criteria: LEAST RESTRAINT VIOLATION 

Structure Validation

Currently 1BUY does not have a validation slider image.

Entry History 

Deposition Data

• Released Date: 1999-09-10 
Deposition Author(s): Cheetham, J.C., Smith, D.M., Aoki, K.H., Stevenson, J.L., Hoeffel, T.J., Syed, R.S., Egrie, J., Harvey, T.S.

Revision History  

• Version 1.0: 1999-09-10
  Type: Initial release
  
• Version 1.1: 2008-04-27
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2021-11-03
  Changes: Database references, Derived calculations
• Version 1.4: 2023-12-27
  Changes: Data collection
• Version 1.5: 2024-11-13
  Changes: Structure summary