Crystal Structure of Wild-type Klebsiella aerogenes Urease at 100K
Pearson, M.A., Karplus, P.A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
UREASE ALPHA SUBUNIT | A [auth C] | 567 | Klebsiella aerogenes | Mutation(s): 1  EC: 3.5.1.5 | |
UniProt | |||||
Find proteins for P18314 (Klebsiella aerogenes) Explore P18314  Go to UniProtKB:  P18314 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P18314 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
UREASE BETA SUBUNIT | 101 | Klebsiella aerogenes | Mutation(s): 0  EC: 3.5.1.5 | ||
UniProt | |||||
Find proteins for P18315 (Klebsiella aerogenes) Explore P18315  Go to UniProtKB:  P18315 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P18315 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
UREASE GAMMA SUBUNIT | C [auth A] | 100 | Klebsiella aerogenes | Mutation(s): 0  EC: 3.5.1.5 | |
UniProt | |||||
Find proteins for P18316 (Klebsiella aerogenes) Explore P18316  Go to UniProtKB:  P18316 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P18316 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NI Query on NI | D [auth C], E [auth C] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
KCX Query on KCX | A [auth C] | L-PEPTIDE LINKING | C7 H14 N2 O4 | LYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 168.96 | α = 90 |
b = 168.96 | β = 90 |
c = 168.96 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
TNT | refinement |