1A16
AMINOPEPTIDASE P FROM E. COLI WITH THE INHIBITOR PRO-LEU
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1a16a1 | Alpha and beta proteins (a/b) | Ribonuclease H-like motif | Creatinase/prolidase N-terminal domain | Creatinase/prolidase N-terminal domain | Aminopeptidase P | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d1a16a2 | Alpha and beta proteins (a+b) | Creatinase/aminopeptidase | Creatinase/aminopeptidase | Creatinase/aminopeptidase | Aminopeptidase P, C-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Peptidase_M24 | e1a16A1 | A: a+b duplicates or obligate multimers | X: Creatinase/aminopeptidase-like | H: Creatinase/aminopeptidase (From Topology) | T: Creatinase/aminopeptidase | F: Peptidase_M24 | ECOD (1.6) |
A | AMP_N | e1a16A2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Creatinase/prolidase N-terminal domain (From Topology) | T: Creatinase/prolidase N-terminal domain | F: AMP_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Creatine Amidinohydrolase | Chain A, domain 1 | CATH (4.3.0) |
A | 3.90.230.10 | Alpha Beta | Alpha-Beta Complex | Creatine Amidinohydrolase | Creatinase/methionine aminopeptidase superfamily | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05195 | Aminopeptidase P, N-terminal domain (AMP_N) | Aminopeptidase P, N-terminal domain | This domain is structurally very similar [1] to the creatinase N-terminal domain (Pfam:PF01321). However, little or no sequence similarity exists between the two families. | Domain | |
PF00557 | Metallopeptidase family M24 (Peptidase_M24) | Metallopeptidase family M24 | This family contains metallopeptidases. It also contains non-peptidase homologues such as the N terminal domain of Spt16 which is a histone H3-H4 binding module [3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001714 | Peptidase M24, methionine aminopeptidase | Family | |
IPR001131 | Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site | Conserved Site | |
IPR007865 | Aminopeptidase P, N-terminal | Domain | |
IPR029149 | Creatinase/Aminopeptidase P/Spt16, N-terminal | Homologous Superfamily | |
IPR052433 | Xaa-Pro dipeptidase-like | Family | |
IPR036005 | Creatinase/aminopeptidase-like | Homologous Superfamily | |
IPR000994 | Peptidase M24 | Domain |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
Xaa-Pro aminopeptidase M-CSA #379 | Aminopeptidase P cleaves an Xaa-Pro bond at the N-terminal of a polypeptide (even a dipeptide or tripeptide), where Xaa can be any amino acid. This substrate specificity is important as many biologically active peptides have Xaa-Pro at the N-terminus. | Defined by 11 residues: ASP:A_4-38HIS:A-243ASP:A-260ASP:A-271HIS:A-350HIS:A-354HIS:A-361GLU:A-383TYR:A-387ARG:A-404GLU:A-406 | EC: 3.4.11.9 (PDB Primary Data) |