1DD3 | pdb_00001dd3

CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L12 FROM THERMOTOGA MARITIMA


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd1dd3d_ All alpha proteins Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Cd1dd3c_ All alpha proteins Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Ad1dd3a1 All alpha proteins Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Ad1dd3a2 Alpha and beta proteins (a+b) ClpS-like ClpS-like Ribosomal protein L7/12, C-terminal domain Ribosomal protein L7/12, C-terminal domain (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Bd1dd3b1 All alpha proteins Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Bd1dd3b2 Alpha and beta proteins (a+b) ClpS-like ClpS-like Ribosomal protein L7/12, C-terminal domain Ribosomal protein L7/12, C-terminal domain (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyRibosomal protein L7/12, oligomerisation (N-terminal) domain 8033488 3001092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibosomal protein L7/12, oligomerisation (N-terminal) domain 8033488 3001092 SCOP2B (2022-06-29)
ASCOP2 FamilyRibosomal protein L7/12, C-terminal domain 8022698 4001156 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyClpS-like 8035078 3000936 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyRibosomal protein L7/12, oligomerisation (N-terminal) domain 8033488 3001092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyClpS-like 8035078 3000936 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRibosomal protein L7/12, oligomerisation (N-terminal) domain 8033488 3001092 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DFlavi_capside1dd3D1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF: Flavi_capsidECOD (develop294)
CFlavi_capside1dd3C1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF: Flavi_capsidECOD (develop294)
AHSP90e1dd3A2 A: alpha bundlesX: EGF-likeH: LDL receptor-like moduleT: LDL receptor-like moduleF: HSP90ECOD (develop294)
APS-DHe1dd3A3 A: alpha bundlesX: PBZ domainH: PBZ domainT: PBZ domainF: PS-DHECOD (develop294)
BHSP90e1dd3B2 A: alpha bundlesX: EGF-likeH: LDL receptor-like moduleT: LDL receptor-like moduleF: HSP90ECOD (develop294)
BPS-DHe1dd3B3 A: alpha bundlesX: PBZ domainH: PBZ domainT: PBZ domainF: PS-DHECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, D
PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
A, B
PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
A, B
PF00542Ribosomal protein L7/L12 C-terminal domain (Ribosomal_L12)Ribosomal protein L7/L12 C-terminal domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
50S RIBOSOMAL PROTEIN L7/L12
A, B
50S RIBOSOMAL PROTEIN L7/L12