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CRYSTAL STRUCTURE OF WILD-TYPE KLEBSIELLA AEROGENES UREASE AT 100K External Resource: Annotation Chains Domain Info Class Fold Superfamily Family Domain Species Provenance Source (Version) A [auth C] d1ejxc1 All beta proteins Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases alpha-Subunit of urease alpha-Subunit of urease (Klebsiella aerogenes ) [TaxId: 548 ], SCOPe (2.08) A [auth C] d1ejxc2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Metallo-dependent hydrolases alpha-subunit of urease, catalytic domain alpha-subunit of urease, catalytic domain (Klebsiella aerogenes ) [TaxId: 548 ], SCOPe (2.08) B d1ejxb_ All beta proteins beta-clip Urease, beta-subunit Urease, beta-subunit Urease, beta-subunit (Klebsiella aerogenes ) [TaxId: 548 ], SCOPe (2.08) C [auth A] d1ejxa_ Alpha and beta proteins (a+b) Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit (Klebsiella aerogenes ) [TaxId: 548 ], SCOPe (2.08)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) A [auth C] SCOP2B Superfamily Composite domain of metallo-dependent hydrolases 8043160 3000176 SCOP2B (2021-05-27) A [auth C] SCOP2B Superfamily Composite domain of metallo-dependent hydrolases 8043160 3000176 SCOP2B (2021-05-27) A [auth C] SCOP2B Superfamily Metallo-dependent hydrolases 8043413 3000428 SCOP2B (2021-05-27) A [auth C] SCOP2B Superfamily Metallo-dependent hydrolases 8043413 3000428 SCOP2B (2021-05-27) B SCOP2 Family Urease beta-subunit 8032045 4002967 SCOP2 (2021-05-27) B SCOP2 Superfamily Urease beta-subunit 8044423 3001949 SCOP2 (2021-05-27) C [auth A] SCOP2 Family Urease gamma-subunit 8032044 4000909 SCOP2 (2021-05-27) C [auth A] SCOP2 Superfamily Urease gamma-subunit 8044422 3001945 SCOP2 (2021-05-27)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) A [auth C] PF00449,PF01979 e1ejxC1 A: beta sandwiches X: Composite domain of metallo-dependent hydrolases (From Topology) H: Composite domain of metallo-dependent hydrolases (From Topology) T: Composite domain of metallo-dependent hydrolases F: PF00449,PF01979 ECOD (1.6) A [auth C] PF01979 e1ejxC2 A: a/b barrels X: TIM beta/alpha-barrel H: TIM barrels (From Topology) T: TIM barrels F: PF01979 ECOD (1.6) B PF00699 e1ejxB1 A: beta sandwiches X: Immunoglobulin-like beta-sandwich H: Urease, beta-subunit (From Topology) T: Urease, beta-subunit F: PF00699 ECOD (1.6) C [auth A] PF00547 e1ejxA1 A: a+b two layers X: Urease, gamma-subunit (From Topology) H: Urease, gamma-subunit (From Topology) T: Urease, gamma-subunit F: PF00547 ECOD (1.6)
Chains Accession Name Description Comments Source A [auth C] PF00449 Urease alpha-subunit, N-terminal domain (Urease_alpha) Urease alpha-subunit, N-terminal domain The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit. Domain A [auth C] PF01979 Amidohydrolase family (Amidohydro_1) Amidohydrolase family This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisatio ... This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source [2]. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyse the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit [3]. Dihydroorotases (EC:3.5.2.3) are also included [4-5]. Less Domain PF00699 Urease beta subunit (Urease_beta) Urease beta subunit This subunit is known as alpha in Heliobacter. Domain C [auth A] PF00547 Urease, gamma subunit (Urease_gamma) Urease, gamma subunit Urease is a nickel-binding enzyme that catalyses the hydrolysis of urea to carbon dioxide and ammonia. Domain
Chains Polymer Molecular Function Biological Process Cellular Component A [auth C] UREASE ALPHA SUBUNIT UREASE BETA SUBUNIT C [auth A] UREASE GAMMA SUBUNIT