1FGD
EPIDERMAL GROWTH FACTOR (EGF) SUBDOMAIN OF HUMAN THROMBOMODULIN (NMR, 11 STRUCTURES)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1fgda_ | Peptides | Thrombomodulin EGF domain fragment (residues 409-426) | Thrombomodulin EGF domain fragment (residues 409-426) | Thrombomodulin EGF domain fragment (residues 409-426) | Thrombomodulin EGF domain fragment (residues 409-426) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12662 | Complement Clr-like EGF-like (cEGF) | Complement Clr-like EGF-like | cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteristic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL recepto ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR052126 | Spindle_Organization_and_Thrombomodulin | Family | |
IPR016187 | C-type lectin fold | Homologous Superfamily | |
IPR018097 | EGF-like calcium-binding, conserved site | Conserved Site | |
IPR026823 | Complement Clr-like EGF domain | Domain | |
IPR001304 | C-type lectin-like | Domain | |
IPR016186 | C-type lectin-like/link domain superfamily | Homologous Superfamily | |
IPR000742 | EGF-like domain | Domain | |
IPR049883 | NOTCH1 EGF-like calcium-binding domain | Domain | |
IPR015149 | Thrombomodulin-like, EGF-like | Domain | |
IPR009030 | Growth factor receptor cysteine-rich domain superfamily | Homologous Superfamily | |
IPR001881 | EGF-like calcium-binding domain | Domain | |
IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PTM |