1H9M
Two crystal structures of the cytoplasmic molybdate-binding protein ModG suggest a novel cooperative binding mechanism and provide insights into ligand-binding specificity. PEG-grown form with molybdate bound
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1h9ma1 | All beta proteins | OB-fold | MOP-like | BiMOP, duplicated molybdate-binding domain | Cytoplasmic molybdate-binding protein ModG | (Azotobacter vinelandii ) [TaxId: 354 ], | SCOPe (2.08) |
B | d1h9mb1 | All beta proteins | OB-fold | MOP-like | BiMOP, duplicated molybdate-binding domain | Cytoplasmic molybdate-binding protein ModG | (Azotobacter vinelandii ) [TaxId: 354 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | BiMOP, duplicated molybdate-binding domain | 8020681 | 4000175 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | MOP-like | 8033061 | 3000099 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | MOP-like | 8033065 | 3000099 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | MOP-like | 8033061 | 3000099 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | MOP-like | 8033065 | 3000099 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TOBE | e1h9mA1 | A: beta barrels | X: OB-fold | H: MOP-like (From Topology) | T: MOP-like | F: TOBE | ECOD (1.6) |
B | TOBE | e1h9mB1 | A: beta barrels | X: OB-fold | H: MOP-like (From Topology) | T: MOP-like | F: TOBE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.50.100 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | CATH (4.3.0) |
B | 2.40.50.100 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03459 | TOBE domain (TOBE) | TOBE domain | The TOBE domain [1] (Transport-associated OB) always occurs as a dimer as the C-terminal strand of each domain is supplied by the partner. Probably involved in the recognition of small ligands such as molybdenum (eg Swiss:P46930) and sulfate (Swiss: ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
MOLYBDENUM-BINDING-PROTEIN | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004606 | Molybdenum-pterin binding domain | Domain | |
IPR051815 | Molybdate-responsive transcriptional regulator | Family | |
IPR008995 | Molybdate/tungstate binding, C-terminal | Homologous Superfamily | |
IPR005116 | Transport-associated OB, type 1 | Domain |