Crystal Structure of the Complex of Human Epidermal Growth Factor and Receptor Extracellular Domains.
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | EGF/Laminin-like | 8033508 | 3000412 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | EGF/Laminin-like | 8033508 | 3000412 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | e1ivoC1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: EGF_CA | F: | ECOD (20:10:01) | |
| D | e1ivoD1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: EGF_CA | F: | ECOD (20:10:01) | |
| A | e1ivoA1 | A: amino-terminal domain of OmpATb | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: KR | F: | ECOD (20:10:01) | |
| A | e1ivoA4 | A: Alpha helical domain of ribonucleotide reductases | X: Alpha helical domain of ribonucleotide reductases | H: Alpha helical domain of ribonucleotide reductases | T: Rhodanese | F: | ECOD (20:10:01) | |
| B | e1ivoB1 | A: amino-terminal domain of OmpATb | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: KR | F: | ECOD (20:10:01) | |
| B | e1ivoB3 | A: Alpha helical domain of ribonucleotide reductases | X: Alpha helical domain of ribonucleotide reductases | H: Alpha helical domain of ribonucleotide reductases | T: Rhodanese | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
| D | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
| A | 3.80.20.20 | Alpha Beta | Alpha-Beta Horseshoe | 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a' | Chain A | CATH (4.3.0) |
| A | 2.10.220.10 | Mainly Beta | Ribbon | Hormone Receptor, Insulin-like Growth Factor Receptor 1 | Chain A domain 2 | CATH (4.3.0) |
| B | 3.80.20.20 | Alpha Beta | Alpha-Beta Horseshoe | 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a' | Chain A | CATH (4.3.0) |
| B | 2.10.220.10 | Mainly Beta | Ribbon | Hormone Receptor, Insulin-like Growth Factor Receptor 1 | Chain A domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00008 | EGF-like domain (EGF) | EGF-like domain | There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ... | Domain | |
| PF00757 | Furin-like cysteine rich region (Furin-like) | Furin-like cysteine rich region | Domain | ||
| PF01030 | Receptor L domain (Recep_L_domain) | Receptor L domain | - | Repeat | |
| PF14843 | Growth factor receptor domain IV (GF_recep_IV) | Growth factor receptor domain IV | This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (Pfam:PF00757) regulates the binding of ligands to the receptor L domains (Pfam:PF01030) [1]. | Domain |














