1JEE | pdb_00001jee

Crystal Structure of ATP Sulfurylase in complex with chlorate

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1jeea1	All beta proteins	PUA domain-like	PUA domain-like	ATP sulfurylase N-terminal domain	ATP sulfurylase N-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
A	d1jeea2	Alpha and beta proteins (a/b)	Adenine nucleotide alpha hydrolase-like	Nucleotidylyl transferase	ATP sulfurylase catalytic domain	ATP sulfurylase catalytic domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
A	d1jeea3	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	ATP sulfurylase C-terminal domain	ATP sulfurylase C-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
B	d1jeeb1	All beta proteins	PUA domain-like	PUA domain-like	ATP sulfurylase N-terminal domain	ATP sulfurylase N-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
B	d1jeeb2	Alpha and beta proteins (a/b)	Adenine nucleotide alpha hydrolase-like	Nucleotidylyl transferase	ATP sulfurylase catalytic domain	ATP sulfurylase catalytic domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
B	d1jeeb3	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	ATP sulfurylase C-terminal domain	ATP sulfurylase C-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	PUA domain-like	8058314	3001015	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	P-loop nucleotide/nucleoside kinase-like	8058317	3002021	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Nucleotidylyl transferase	8058315	3001541	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	P-loop nucleotide/nucleoside kinase-like	8058317	3002021	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	PUA domain-like	8058314	3001015	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Nucleotidylyl transferase	8058315	3001541	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Peptidase_S46, Trypsin_2	e1jeeA1	A: alpha bundles	X: Cloacin translocation domain	H: LigT-related	T: LigT-related	F: Peptidase_S46, Trypsin_2	ECOD (develop294)
A	GBP	e1jeeA2	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: GBP	ECOD (develop294)
A	Anticodon_3	e1jeeA3	A: alpha bundles	X: P-loop domains-like	H: beta-helix of amnionless (AMN) extracellular domain	T: beta-helix of amnionless (AMN) extracellular domain	F: Anticodon_3	ECOD (develop294)
B	Peptidase_S46, Trypsin_2	e1jeeB1	A: alpha bundles	X: Cloacin translocation domain	H: LigT-related	T: LigT-related	F: Peptidase_S46, Trypsin_2	ECOD (develop294)
B	GBP	e1jeeB2	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: GBP	ECOD (develop294)
B	Anticodon_3	e1jeeB3	A: alpha bundles	X: P-loop domains-like	H: beta-helix of amnionless (AMN) extracellular domain	T: beta-helix of amnionless (AMN) extracellular domain	F: Anticodon_3	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.620	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	HUPs	CATH (4.3.0)
A	3.10.400.10	Alpha Beta	Roll	Sulfate adenylyltransferase	Sulfate adenylyltransferase	CATH (4.3.0)
A	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
B	3.40.50.620	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	HUPs	CATH (4.3.0)
B	3.10.400.10	Alpha Beta	Roll	Sulfate adenylyltransferase	Sulfate adenylyltransferase	CATH (4.3.0)
B	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF14306	PUA-like domain (PUA_2)	PUA-like domain	This PUA like domain is found at the N-terminus of ATP-sulfurylase enzymes.	Domain
A, B	PF01747	ATP-sulfurylase (ATP-sulfurylase)	ATP-sulfurylase	This domain is the catalytic domain of ATP-sulfurylase or sulfate adenylyltransferase EC:2.7.7.4 some of which are part of a bifunctional polypeptide chain associated with adenosyl phosphosulphate (APS) kinase Pfam:PF01583. Both enzymes are required ...	This domain is the catalytic domain of ATP-sulfurylase or sulfate adenylyltransferase EC:2.7.7.4 some of which are part of a bifunctional polypeptide chain associated with adenosyl phosphosulphate (APS) kinase Pfam:PF01583. Both enzymes are required for PAPS (phosphoadenosine-phosphosulfate) synthesis from inorganic sulphate [2]. ATP sulfurylase catalyses the synthesis of adenosine-phosphosulfate APS from ATP and inorganic sulphate [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	SULFATE ADENYLYLTRANSFERASE	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding adenylyltransferase activity transferase activity sulfate adenylyltransferase (ATP) activity sulfate adenylyltransferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	oxoacid metabolic process sulfur amino acid metabolic process carboxylic acid metabolic process sulfur compound metabolic process metabolic process cellular process small molecule metabolic process organic acid metabolic process sulfur compound biosynthetic process biosynthetic process hydrogen sulfide biosynthetic process hydrogen sulfide metabolic process sulfate assimilation sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR015947	PUA-like superfamily	Homologous Superfamily
A, B	IPR025980	ATP-sulfurylase PUA-like domain	Domain
A, B	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	Homologous Superfamily
A, B	IPR027535	Sulfate adenylyltransferase	Family
A, B	IPR002650	Sulphate adenylyltransferase	Family
A, B	IPR024951	Sulphate adenylyltransferase catalytic domain	Domain
A, B	IPR050512	Sulfate Adenylyltransferase/APS Kinase	Family
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.