Crystal Structure of the EphB2-ephrinB2 complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | galactose-binding domain-like | 8039463 | 3000087 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | galactose-binding domain-like | 8039463 | 3000087 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | galactose-binding domain-like | 8039463 | 3000087 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | galactose-binding domain-like | 8039463 | 3000087 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Cupredoxins | 8039593 | 3000886 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Cupredoxins | 8039593 | 3000886 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Cupredoxins | 8039593 | 3000886 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Cupredoxins | 8039593 | 3000886 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | CBM27 | e1kgyD1 | A: a/b three-layered sandwiches | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: CBM27 | ECOD (v294.1) |
| C | CBM27 | e1kgyC1 | A: a/b three-layered sandwiches | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: CBM27 | ECOD (v294.1) |
| B | CBM27 | e1kgyB1 | A: a/b three-layered sandwiches | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: CBM27 | ECOD (v294.1) |
| A | CBM27 | e1kgyA1 | A: a/b three-layered sandwiches | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: CBM27 | ECOD (v294.1) |
| H | Sod_Cu | e1kgyH1 | A: a/b three-layered sandwiches | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: Sod_Cu | ECOD (v294.1) |
| G | Sod_Cu | e1kgyG1 | A: a/b three-layered sandwiches | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: Sod_Cu | ECOD (v294.1) |
| F | Sod_Cu | e1kgyF1 | A: a/b three-layered sandwiches | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: Sod_Cu | ECOD (v294.1) |
| E | Sod_Cu | e1kgyE1 | A: a/b three-layered sandwiches | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: Sod_Cu | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
| C | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
| B | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
| A | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
| H | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
| G | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
| F | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
| E | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01404 | Ephrin receptor ligand binding domain (Ephrin_lbd) | Ephrin receptor ligand binding domain | The Eph receptors, which bind to ephrins Pfam:PF00812 are a large family of receptor tyrosine kinases. This family represents the amino terminal domain which binds the ephrin ligand [1]. | Domain | |
| PF00812 | Ephrin (Ephrin) | Ephrin | Domain |














